G244379


Basic Information

Item Value
gene id G244379
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30174013 ~ 30177408 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU278995
CATTTCACCTGAGTCCTAAATAATACACCACAAGATCCCAACTCCCAAGGGAGCTTCCCAGTCCCTGACCTAACCTAATATTGAAAGTAAACACCTAGGCCTACATTGGCTTTCATTTGGCCTATTTGAGAAGAATGATTCACTGCATTTTACCCTCCTCCTGTCCAAAGAGAAGGGAAGATGAGCTAGCCTATAAAAAAGTGTCTTTATGGTAATCCGCTGCATGCTTTATATTCCTCTGTGGTCACTAAGGCTCTTTAAACCTGTTAAATGCTACACCAACAAACAATTCACTGTAATGGCAAAATTACAGTGCATGAACAAACCCTATGAGAATTGAATGGATAGCTTTCAGACTTCTGCATACATATACCACACATGAATTATGATACAAAAATGTCAGTGGAGAGACCAATCCAACGGTTGGAACTATTGATAGCATGCCTCCACTATTCATTCTATACAGCAAGCTCCACTTTCACCATTCAGTCTTGCGATCATCACTATTTGCAGTCTAAAACTAGAAACATAAAAAGTGAGTCAACCACTTAGCTGTAGCATACTGCATTGTGGGTGCACAAAAGTCGGGGCAAAATAAAATCTGTGCTCATCACAAAGTTCAGCATTGCATATAATAACCCTTTGTATCTAGGAATAAAGAAATGGGCAGAGACATATAATGTGCTTATCTGCAGTCTACTAGTATGGACACTTTCCAAGATACAAAAATAAAGAGAACCCAAGACAATCAAACTAGTGTCCATCCATTTCCAATGGAAAATGCCAAGTGGCTACTAATTGCCCGTCTAGCTTTACACGTTCAGTTGACAGATACTGAGATAGTCAAGACAGTGAAAATCCCAAAGCTGCTGGACGTCAGGTTTGCATGGTGCATTACCAAACCCAAATCAGAACACAATGACAGATGAACTGTCGCAAATCTACAGCATATGGCCTAGTTTATCTAGTTTACAAATATAGATGGCGAACCTTTACAAACCATAATATTGACATGCTAATTACCTAGCTAGTGCGCTCGTTCCAAACCACagctcaaacaaaacatgcacataAAGAACGCCACTTAGCTAGCTAGAGTATATAGTTACTTCAACTAATACGCTGGCTAGCTACATATCATTTTGTCAACGTTTTAACTTAAACCAAGGAAGGACAAGTAACGTTAATCTGTGCATTTTTGGCTAGAAGCAGAAAGTAGAGCTAGCAACAAAGGCTAACAGAAGTTAGCTTTTTAGCGAAGCTAGCTAAGGTGAAAAAGCACTGCTGCATAAAAAAAGTTACTTACGTTTCAGACTGCGGTAGCAAATATACCATCTAAATACAACAGTAAATCATAAACATGTCCCCATACCAGTGTCTTTAATCGCCCTAGACATCTCCAAGTAGGGCTTCCACGCATTATGTGCAGTGCAATGTCCAAGGACCTGTTCGTGCAAGGAATGttgagaatacattttttttcacgCGCACTCGCGCAAGTGAAGTCGTGCCACAGACCAAACTAATCAACCACGAAGACACTGGACGGTCTCTGGTAAGTGGCAAATGAAAAAAAACTTCACTACAAAAGTTTAACTATAAAGCGTTTATGTCGGGCCAAATACAGTCTTACAATTATTTCCATGTCAACCCATTTTTGAACTAATGTGAAGTTATATGCATTACACATGCATAAAGAAATTGCATATGGGTAGGCCTTGCATGAAATAATGAAAATTATGTTTCAGTGGCAGGAGAAAATCTAaagatacaacaacaacaacaaaatcaacaTTGCAAATAGCATGTAGATGTACAGGTTTGGGCACTTGGCTTATCAATGGGAGTGCCAGAGCAAATAGCTTCCTTTGACATTGGCTGACACTGACAGGCACAGTGTGATAGCTTTCTCACAGTGTGAAGATAGATCCATTGTGAATTTATTTTTCTAGACTTAAAGCCAACATGGAAGACAATGTTGTCACTCTCCCCAAAGTTTAACAAGACCATCTAACATCAACAAGAGACATGTCACACAACCATAAGAAATGTCATAGCTTTGTGATGTCACTTTGGAGGGCACCTCCTAAGCTTTGGATCAGATACAGTTATCATGATCCAAGAATCATGGTTAATTATCAATCATGTGCTTTCTTAGTGTTGGCCTGTCATTTCATTCAGCTGTCAACAACACGAATTTGCTAGATATTACCACACAATGGGCTCTGTGTGATAAGGGTAGACGTTCAGGGAGGGTACTGACTGAGAGGGACACAAAGAGGGCTGTTGGCTTACCTGTTTTCTTATGCTGGCTGATCTTGGTGTGTGCCGTTCCCAAGGGTACAAGGGTCTGTTTGATGCCACCTTGGCCTTTGGAGGCTTTGCGGTACTTGTGGAGCCACTCAAACTTCGGTGCTTCCTTGGGAGACTTGCAAACATCTTgcgagtttctcacattcttcctGTTTACAAGAATAGCTGCCAGGTTACCAAAACTTTCCATCACTGTTTCCTCTCACAGAGTAAAAGTGAGTGTGGCCCtttttaaaaaatatctttaGTCCTCCATCTTAAATTTAAGAGCTCCATTTGATAAAGTAGTGAGCTAATGCCAAAAATGACACATACATAGCAAAGTAGACTGTCTCTCAACGAATCCAGTGGCTCATCCCATGAACAGGAAAAAAACATGTAAAAGCCGAAAGCAAATATATAAGTCAAATGGAAGGAAATATTATATAGCAACAGACATATACTACCCAGGAAGAGCACACAGCACTAAAACTCTGAGCCACCCCAGTCTCTTTTCCTTCTTtcacttgctctctttctctgatgccatctctctct

Function

NR:

description
type II inositol 1,4,5-trisphosphate 5-phosphatase-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278995 True 2850 TUCP 0.40 2 30174013 30177408

Neighbor

gene id symbol gene type direction distance location
LOC110517552 LOC106583212 coding downstream 35310 30129253 ~ 30138703 (-)
LOC110517528 LOC106583195 coding downstream 272852 29779075 ~ 29901161 (-)
LOC110517512 LOC106605177 coding downstream 677133 29495265 ~ 29496880 (-)
csf3r csf3r coding downstream 686535 29476256 ~ 29487478 (-)
mrps15 LOC106583175 coding downstream 710971 29458530 ~ 29463042 (-)
LOC110517624 LOC106583256 coding upstream 45853 30223261 ~ 30249900 (-)
smpdl3b smpdl3b coding upstream 121349 30298757 ~ 30304553 (-)
LOC110517657 themis2 coding upstream 146349 30323757 ~ 30336172 (-)
LOC110517711 LOC106583306 coding upstream 166552 30343960 ~ 30361770 (-)
LOC110517778 LOC106583350 coding upstream 400390 30577798 ~ 30591085 (-)
G244358 NA non-coding downstream 44144 30129591 ~ 30129869 (-)
G244251 NA non-coding downstream 95013 30078700 ~ 30079000 (-)
G244157 NA non-coding downstream 158586 30015217 ~ 30015427 (-)
G244156 NA non-coding downstream 158923 30014878 ~ 30015090 (-)
G244151 NA non-coding downstream 161330 30012466 ~ 30012683 (-)
G244385 NA non-coding upstream 22945 30200353 ~ 30200561 (-)
G244389 LOC106583245 non-coding upstream 25961 30203369 ~ 30204352 (-)
G244391 NA non-coding upstream 31217 30208625 ~ 30208903 (-)
G244392 LOC106583245 non-coding upstream 31888 30209296 ~ 30209919 (-)
G244393 LOC106583245 non-coding upstream 36365 30211570 ~ 30217682 (-)
G244338 NA other downstream 44799 30088843 ~ 30129214 (-)
LOC110517486 LOC106583166 other downstream 715967 29456450 ~ 29458390 (-)
G243154 NA other downstream 1021384 29132316 ~ 29152629 (-)
G242796 NA other downstream 1227721 28945741 ~ 28946292 (-)
LOC110517244 LOC106582991 other downstream 1387735 28781383 ~ 28786278 (-)
G244381 LOC106583245 other upstream 21824 30199232 ~ 30199770 (-)
G245366 LOC106605077 other upstream 767545 30944953 ~ 30945843 (-)
LOC110518371 LOC106583543 other upstream 1385137 31562384 ~ 31631107 (-)
G248239 LOC106605043 other upstream 3242021 33419429 ~ 33419707 (-)

Expression


Co-expression Network