Gene
RNA
| Item | Value |
|---|---|
| gene id | G244381 |
| gene name | LOC106583245 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 30199232 ~ 30199770 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| metal regulatory transcription factor 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278997 | True | 539 | TUCP | 0.61 | 1 | 30199232 | 30199770 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517552 | LOC106583212 | coding | downstream | 60529 | 30129253 ~ 30138703 (-) |
| LOC110517528 | LOC106583195 | coding | downstream | 298071 | 29779075 ~ 29901161 (-) |
| LOC110517512 | LOC106605177 | coding | downstream | 702352 | 29495265 ~ 29496880 (-) |
| csf3r | csf3r | coding | downstream | 711754 | 29476256 ~ 29487478 (-) |
| mrps15 | LOC106583175 | coding | downstream | 736190 | 29458530 ~ 29463042 (-) |
| LOC110517624 | LOC106583256 | coding | upstream | 23491 | 30223261 ~ 30249900 (-) |
| smpdl3b | smpdl3b | coding | upstream | 98987 | 30298757 ~ 30304553 (-) |
| LOC110517657 | themis2 | coding | upstream | 123987 | 30323757 ~ 30336172 (-) |
| LOC110517711 | LOC106583306 | coding | upstream | 144190 | 30343960 ~ 30361770 (-) |
| LOC110517778 | LOC106583350 | coding | upstream | 378028 | 30577798 ~ 30591085 (-) |
| G244358 | NA | non-coding | downstream | 69363 | 30129591 ~ 30129869 (-) |
| G244251 | NA | non-coding | downstream | 120232 | 30078700 ~ 30079000 (-) |
| G244157 | NA | non-coding | downstream | 183805 | 30015217 ~ 30015427 (-) |
| G244156 | NA | non-coding | downstream | 184142 | 30014878 ~ 30015090 (-) |
| G244151 | NA | non-coding | downstream | 186549 | 30012466 ~ 30012683 (-) |
| G244385 | NA | non-coding | upstream | 583 | 30200353 ~ 30200561 (-) |
| G244389 | LOC106583245 | non-coding | upstream | 3599 | 30203369 ~ 30204352 (-) |
| G244391 | NA | non-coding | upstream | 8855 | 30208625 ~ 30208903 (-) |
| G244392 | LOC106583245 | non-coding | upstream | 9526 | 30209296 ~ 30209919 (-) |
| G244393 | LOC106583245 | non-coding | upstream | 14003 | 30211570 ~ 30217682 (-) |
| G244379 | NA | other | downstream | 21824 | 30174013 ~ 30177408 (-) |
| G244338 | NA | other | downstream | 70018 | 30088843 ~ 30129214 (-) |
| LOC110517486 | LOC106583166 | other | downstream | 741186 | 29456450 ~ 29458390 (-) |
| G243154 | NA | other | downstream | 1046603 | 29132316 ~ 29152629 (-) |
| G242796 | NA | other | downstream | 1252940 | 28945741 ~ 28946292 (-) |
| G245366 | LOC106605077 | other | upstream | 745183 | 30944953 ~ 30945843 (-) |
| LOC110518371 | LOC106583543 | other | upstream | 1362775 | 31562384 ~ 31631107 (-) |
| G248239 | LOC106605043 | other | upstream | 3219659 | 33419429 ~ 33419707 (-) |
| G249485 | LOC106584080 | other | upstream | 4157505 | 34357275 ~ 34359451 (-) |
