Gene
RNA
| Item | Value |
|---|---|
| gene id | G244493 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 30256741 ~ 30256946 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU279137 | True | 206 | lncRNA | 0.33 | 1 | 30256741 | 30256946 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517624 | LOC106583256 | coding | downstream | 6841 | 30223261 ~ 30249900 (-) |
| LOC110517552 | LOC106583212 | coding | downstream | 118038 | 30129253 ~ 30138703 (-) |
| LOC110517528 | LOC106583195 | coding | downstream | 355580 | 29779075 ~ 29901161 (-) |
| LOC110517512 | LOC106605177 | coding | downstream | 759861 | 29495265 ~ 29496880 (-) |
| csf3r | csf3r | coding | downstream | 769263 | 29476256 ~ 29487478 (-) |
| smpdl3b | smpdl3b | coding | upstream | 41811 | 30298757 ~ 30304553 (-) |
| LOC110517657 | themis2 | coding | upstream | 66811 | 30323757 ~ 30336172 (-) |
| LOC110517711 | LOC106583306 | coding | upstream | 87014 | 30343960 ~ 30361770 (-) |
| LOC110517778 | LOC106583350 | coding | upstream | 320852 | 30577798 ~ 30591085 (-) |
| LOC118951153 | LOC106605099 | coding | upstream | 335157 | 30592103 ~ 30593827 (-) |
| G244393 | LOC106583245 | non-coding | downstream | 39059 | 30211570 ~ 30217682 (-) |
| G244392 | LOC106583245 | non-coding | downstream | 46822 | 30209296 ~ 30209919 (-) |
| G244391 | NA | non-coding | downstream | 47838 | 30208625 ~ 30208903 (-) |
| G244389 | LOC106583245 | non-coding | downstream | 52389 | 30203369 ~ 30204352 (-) |
| G244385 | NA | non-coding | downstream | 56180 | 30200353 ~ 30200561 (-) |
| G244518 | NA | non-coding | upstream | 26292 | 30283238 ~ 30283756 (-) |
| G244519 | NA | non-coding | upstream | 27267 | 30284213 ~ 30284643 (-) |
| G244520 | NA | non-coding | upstream | 27961 | 30284907 ~ 30285190 (-) |
| G244521 | NA | non-coding | upstream | 28247 | 30285193 ~ 30285400 (-) |
| G244522 | NA | non-coding | upstream | 28740 | 30285686 ~ 30285887 (-) |
| G244381 | LOC106583245 | other | downstream | 56971 | 30199232 ~ 30199770 (-) |
| G244379 | NA | other | downstream | 79333 | 30174013 ~ 30177408 (-) |
| G244338 | NA | other | downstream | 127527 | 30088843 ~ 30129214 (-) |
| LOC110517486 | LOC106583166 | other | downstream | 798695 | 29456450 ~ 29458390 (-) |
| G245366 | LOC106605077 | other | upstream | 688007 | 30944953 ~ 30945843 (-) |
| LOC110518371 | LOC106583543 | other | upstream | 1305599 | 31562384 ~ 31631107 (-) |
| G248239 | LOC106605043 | other | upstream | 3162483 | 33419429 ~ 33419707 (-) |
| G249485 | LOC106584080 | other | upstream | 4100329 | 34357275 ~ 34359451 (-) |
| G249978 | NA | other | upstream | 4632560 | 34889506 ~ 34889954 (-) |
