G244518


Basic Information

Item Value
gene id G244518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30283238 ~ 30283756 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279162
ATTCATCACAGATCACAATTCTGCAATAGAAAAGGTGTGAAGGGAATCTGTCTCTAatatgtctgtgtttctgtgtttctgtgttgcttTCGCAAATGAACATGGTCTTTTTATCCAGTTGGGAGCTTTCCAATCGGTTTTATTTGATTGTCACTCTGTCTCAGGATATCAGCCATGTGAACCCATTTTGCAGCTTATCATAATGTCATGCATCACCAATGAAGCCAAGAGGACCTACAGTTTGATGGTATAACTGTGCAATCAAAGTGCCTCTTGTCATTGCACATCTGAAGCAGAGAATAGCTAAACTCACACATAATTTGCATACTGATGAGCTAGCCATATGTTTTCAATTTAAAATGATACCCGTAGATAATGTATTTGAGGCTAACCATAAACCTGATTTTAAATGATTTTTCCGACATAAAATTGTTTACTGCAAATCCAATACTTGTGTTCTAGGTACAGCACTGCGCCTGAAAATAAGGAGCTGGCAATTTGTAGCCTAATTAAAAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279162 True 519 lncRNA 0.37 1 30283238 30283756

Neighbor

gene id symbol gene type direction distance location
LOC110517624 LOC106583256 coding downstream 33338 30223261 ~ 30249900 (-)
LOC110517552 LOC106583212 coding downstream 144535 30129253 ~ 30138703 (-)
LOC110517528 LOC106583195 coding downstream 382077 29779075 ~ 29901161 (-)
LOC110517512 LOC106605177 coding downstream 786358 29495265 ~ 29496880 (-)
csf3r csf3r coding downstream 795760 29476256 ~ 29487478 (-)
smpdl3b smpdl3b coding upstream 15001 30298757 ~ 30304553 (-)
LOC110517657 themis2 coding upstream 40001 30323757 ~ 30336172 (-)
LOC110517711 LOC106583306 coding upstream 60204 30343960 ~ 30361770 (-)
LOC110517778 LOC106583350 coding upstream 294042 30577798 ~ 30591085 (-)
LOC118951153 LOC106605099 coding upstream 308347 30592103 ~ 30593827 (-)
G244493 NA non-coding downstream 26292 30256741 ~ 30256946 (-)
G244393 LOC106583245 non-coding downstream 65556 30211570 ~ 30217682 (-)
G244392 LOC106583245 non-coding downstream 73319 30209296 ~ 30209919 (-)
G244391 NA non-coding downstream 74335 30208625 ~ 30208903 (-)
G244389 LOC106583245 non-coding downstream 78886 30203369 ~ 30204352 (-)
G244519 NA non-coding upstream 457 30284213 ~ 30284643 (-)
G244520 NA non-coding upstream 1151 30284907 ~ 30285190 (-)
G244521 NA non-coding upstream 1437 30285193 ~ 30285400 (-)
G244522 NA non-coding upstream 1930 30285686 ~ 30285887 (-)
G244526 NA non-coding upstream 5181 30288937 ~ 30291357 (-)
G244381 LOC106583245 other downstream 83468 30199232 ~ 30199770 (-)
G244379 NA other downstream 105830 30174013 ~ 30177408 (-)
G244338 NA other downstream 154024 30088843 ~ 30129214 (-)
LOC110517486 LOC106583166 other downstream 825192 29456450 ~ 29458390 (-)
G245366 LOC106605077 other upstream 661197 30944953 ~ 30945843 (-)
LOC110518371 LOC106583543 other upstream 1278789 31562384 ~ 31631107 (-)
G248239 LOC106605043 other upstream 3135673 33419429 ~ 33419707 (-)
G249485 LOC106584080 other upstream 4073519 34357275 ~ 34359451 (-)
G249978 NA other upstream 4605750 34889506 ~ 34889954 (-)

Expression


Co-expression Network