G244446


Basic Information

Item Value
gene id G244446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30286007 ~ 30287786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279084
tagtgggctctgacttgtggtcagactcgcttaggtggaacaaacttaaatttgcgccttttttcaatgctgatttgaatgtcattgagaaaacagagaaggaTTCCCCAACTGGACGAATTCGGCCCGTGTGTGATTTTATCTGGCCATCCAAGTTTTATGAGCAATAAATAAtactaaaatgtttatttttatttttgttgttggtcATAAACGACAAAAAACatcagcaaatcagctccaagtgattttcattttggaaaactattccaaagtattcccacacaccatagtgatcgtatacaaatgtaagcacggtttgtgagacgcctaagacaggaagaaaaggagacaggatggacagctgatcgacctcgtagtggcagaccacatgtgtaacaacacctgcacaggatcggtacatccgaacatcacacctgtggaacaggtacagaatggcaacaacaactgaccaagttacaccaggaacgaacaatccctccatcagtgctcagactgtcctcaataggctgagagaggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacatcactggcaacaacatcgcctatgggcacaacaACGTTGCctaccatcgctggaccagacaggactggcaaaaagtgctcttcactgatgagtcgcggttttgtctcaccaggggtgacagtcagatttgcatttatcgtcaaaggaatgagcgttacaccgaggcctgtactctggagcgggattgatttggaggtggagggtccgacatggcctggggcggtgtgtcacagcatcatcggactgagcttgttgtcattgcaggcaatctcaacgctgtacgctacagggaagacatcctcctccctcacatggtacccttcctgtaggctcatcctaacatgaccctccagcatgacaatgccaccagccatactgctcattctgtgtgtgatttcctgcaagacaggaatgtcagtgttctgccatggccagcaagtagcccggatctcaatcctacTGAGCACGTCTAGGATGtctggaagagtggggtaacatctcacagcaagaaacGGCAAGAACAGCAAGAactgcagtccatgaggaggagatgcactgcagtacttaatgcagctggtggccacaccagatactgttacttttgacccccccccctccccttgttCGGGGACACATTACTccgttgaatcttgttatgttcatacaaatatttacacatgttatgtttgaaaataaacgcagttgacaatgccaccagccatactgttcatactgtgcgtgatttcctgcaagacaggaatgtcagtgttctgccatggccagcaagtagcccggatctcaatcccattgagcacgtctgggacctgttggatcggaggttgagggctagggccattccccccagaaatgtcagggaacttgcaggtgccttggtggaagagtggggtaacatctcacagcaagaacgggcaaatctggtgcagtccatgaggaggagatgcactccagtacttaatgcagctggtggccacaccagatactgactgttacttttgattttgacctccccctttgttcaggcacacattattcaatttctgttagtcacatgtctgtggaacttgttcagtttatgtctcagttgttgaatcatgttcatacaaatatttacacatgttaagtttgctgaaaataaatgcagttaacagtgagaggacgtttctttttttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279084 True 1780 lncRNA 0.47 1 30286007 30287786

Neighbor

gene id symbol gene type direction distance location
LOC110504010 LOC106583270 coding upstream 4435 30261103 ~ 30281572 (+)
LOC110517635 LOC106583263 coding upstream 65023 30218320 ~ 30220984 (+)
LOC110517613 LOC106583245 coding upstream 68314 30196595 ~ 30217693 (+)
LOC110517587 LOC106583242 coding upstream 89613 30170759 ~ 30196394 (+)
LOC110517569 LOC106583231 coding upstream 120336 30142523 ~ 30165671 (+)
LOC110517644 NA coding downstream 1542 30289328 ~ 30293221 (+)
rpa2 rpa2 coding downstream 22399 30310185 ~ 30323571 (+)
LOC110517685 LOC106605108 coding downstream 48847 30336633 ~ 30342478 (+)
LOC118964376 NA coding downstream 49937 30337723 ~ 30337885 (+)
LOC110517739 med18 coding downstream 75375 30363161 ~ 30367437 (+)
G244445 NA non-coding upstream 1829 30283829 ~ 30284178 (+)
G244443 NA non-coding upstream 3049 30282533 ~ 30282958 (+)
G244294 NA non-coding upstream 147354 30138334 ~ 30138653 (+)
G244293 NA non-coding upstream 147819 30137690 ~ 30138188 (+)
G244447 NA non-coding downstream 15603 30303389 ~ 30306845 (+)
G244433 LOC106583306 non-coding downstream 71033 30358819 ~ 30359857 (+)
G244466 NA non-coding downstream 87105 30374891 ~ 30375142 (+)
G244481 NA non-coding downstream 107867 30395653 ~ 30395929 (+)
G244482 NA non-coding downstream 109347 30397133 ~ 30397350 (+)
G244292 LOC106583212 other upstream 148443 30132399 ~ 30137564 (+)
G243679 LOC107756720 other upstream 595211 29668379 ~ 29690796 (+)
LOC110517275 LOC106583018 other upstream 1251293 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 2536281 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 2562213 27705985 ~ 27723794 (+)
G244691 NA other downstream 343984 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 577780 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 630245 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 other downstream 656952 30939321 ~ 31127608 (+)
G244956 NA other downstream 748731 31036517 ~ 31037252 (+)

Expression


Co-expression Network