G244597


Basic Information

Item Value
gene id G244597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30437279 ~ 30437548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279244
cagcgagagcaacatcattgatgtatacagagaagagagtcggcccgagaattgaatactgtgtcacccccatagagactggcagaggtccagacaacaggccctccgatttgacacactgaactctatctgagaagtagttggtgaaccaggcgaggcagtcattagagaaaccaaggctgttgagtctgccgataagaatgcggtgattgacagagtcgaaagccttagccaggtcgatgaagacggctgcacagtactgtcttttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279244 True 270 lncRNA 0.49 1 30437279 30437548

Neighbor

gene id symbol gene type direction distance location
LOC110504017 LOC106583301 coding upstream 24973 30375575 ~ 30412306 (+)
LOC110517739 med18 coding upstream 69842 30363161 ~ 30367437 (+)
LOC110517685 LOC106605108 coding upstream 94801 30336633 ~ 30342478 (+)
LOC118964376 NA coding upstream 99394 30337723 ~ 30337885 (+)
rpa2 rpa2 coding upstream 113708 30310185 ~ 30323571 (+)
LOC110517766 LOC106605102 coding downstream 111023 30548571 ~ 30576208 (+)
LOC118964363 NA coding downstream 174844 30612392 ~ 30612447 (+)
LOC110517876 LOC106583352 coding downstream 177650 30615198 ~ 30627079 (+)
LOC110517885 LOC106605095 coding downstream 190304 30627852 ~ 30667510 (+)
pex5 LOC106583355 coding downstream 230347 30667895 ~ 30683839 (+)
G244579 NA non-coding upstream 16011 30421031 ~ 30421268 (+)
G244468 NA non-coding upstream 22384 30413279 ~ 30414895 (+)
G244487 NA non-coding upstream 30034 30407025 ~ 30407245 (+)
G244482 NA non-coding upstream 39929 30397133 ~ 30397350 (+)
G244481 NA non-coding upstream 41350 30395653 ~ 30395929 (+)
G244605 NA non-coding downstream 5105 30442653 ~ 30442989 (+)
G244641 NA non-coding downstream 53875 30491423 ~ 30491672 (+)
G244650 NA non-coding downstream 55768 30493316 ~ 30493688 (+)
G244652 NA non-coding downstream 57745 30495293 ~ 30495503 (+)
G244658 NA non-coding downstream 66498 30504046 ~ 30504288 (+)
G244292 LOC106583212 other upstream 299715 30132399 ~ 30137564 (+)
G243679 LOC107756720 other upstream 746483 29668379 ~ 29690796 (+)
LOC110517275 LOC106583018 other upstream 1402565 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 2687553 27725189 ~ 27749972 (+)
LOC110516984 NA other upstream 2713485 27705985 ~ 27723794 (+)
G244691 NA other downstream 194222 30631770 ~ 30632533 (+)
G244851 cep85 other downstream 428018 30865566 ~ 30874608 (+)
LOC110518244 LOC106583484 other downstream 480483 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 other downstream 507190 30939321 ~ 31127608 (+)
G244956 NA other downstream 598969 31036517 ~ 31037252 (+)

Expression


Co-expression Network