Gene
RNA
| Item | Value |
|---|---|
| gene id | G244607 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 30443750 ~ 30443966 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pyridoxal-dependent decarboxylase domain-containing protein 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU279254 | True | 217 | lncRNA | 0.43 | 1 | 30443750 | 30443966 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517711 | LOC106583306 | coding | downstream | 81980 | 30343960 ~ 30361770 (-) |
| LOC110517657 | themis2 | coding | downstream | 107578 | 30323757 ~ 30336172 (-) |
| smpdl3b | smpdl3b | coding | downstream | 139197 | 30298757 ~ 30304553 (-) |
| LOC110517624 | LOC106583256 | coding | downstream | 193850 | 30223261 ~ 30249900 (-) |
| LOC110517552 | LOC106583212 | coding | downstream | 305047 | 30129253 ~ 30138703 (-) |
| LOC110517778 | LOC106583350 | coding | upstream | 133832 | 30577798 ~ 30591085 (-) |
| LOC118951153 | LOC106605099 | coding | upstream | 148137 | 30592103 ~ 30593827 (-) |
| LOC110517847 | tpi1b | coding | upstream | 162998 | 30606964 ~ 30611799 (-) |
| gnb3a | LOC106583400 | coding | upstream | 253841 | 30697807 ~ 30710196 (-) |
| p3h3 | LOC106583419 | coding | upstream | 269940 | 30713906 ~ 30725406 (-) |
| G244606 | NA | non-coding | downstream | 690 | 30442650 ~ 30443060 (-) |
| G244604 | NA | non-coding | downstream | 1313 | 30442120 ~ 30442437 (-) |
| G244580 | NA | non-coding | downstream | 20767 | 30422762 ~ 30422983 (-) |
| G244577 | NA | non-coding | downstream | 25528 | 30417953 ~ 30418222 (-) |
| G244574 | NA | non-coding | downstream | 28905 | 30413483 ~ 30414845 (-) |
| G245157 | NA | non-coding | upstream | 54049 | 30498015 ~ 30498574 (-) |
| G245127 | atp1a3 | non-coding | upstream | 74461 | 30518427 ~ 30576217 (-) |
| G245136 | NA | non-coding | upstream | 100649 | 30544615 ~ 30560777 (-) |
| G245204 | NA | non-coding | upstream | 173929 | 30617895 ~ 30619600 (-) |
| G245219 | NA | non-coding | upstream | 198388 | 30642354 ~ 30652907 (-) |
| G244393 | LOC106583245 | other | downstream | 226161 | 30211570 ~ 30217682 (-) |
| G244381 | LOC106583245 | other | downstream | 243980 | 30199232 ~ 30199770 (-) |
| G244379 | NA | other | downstream | 266342 | 30174013 ~ 30177408 (-) |
| G244338 | NA | other | downstream | 314536 | 30088843 ~ 30129214 (-) |
| LOC110517486 | LOC106583166 | other | downstream | 985704 | 29456450 ~ 29458390 (-) |
| G245366 | LOC106605077 | other | upstream | 500987 | 30944953 ~ 30945843 (-) |
| LOC110518371 | LOC106583543 | other | upstream | 1118579 | 31562384 ~ 31631107 (-) |
| G248239 | LOC106605043 | other | upstream | 2975463 | 33419429 ~ 33419707 (-) |
| G249485 | LOC106584080 | other | upstream | 3913309 | 34357275 ~ 34359451 (-) |
| G249978 | NA | other | upstream | 4445540 | 34889506 ~ 34889954 (-) |
