G245157


Basic Information

Item Value
gene id G245157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30498015 ~ 30498574 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279856
ctgtaattgctgttattgtgaagtggatacgtctaggagcaacaatggctgagccgtaaagtggtaggccacacaagctcacagaacgagaccgccaagtgctgaagcgcatagcgagtaaaataaaaattgtctgtccttgtttgcaacactcacttgTGTACGGCTGCTCGGCCTGGTTTCCgtggctgagcagccacacacaagtctaagatctaAGATTGCGCCATTGGACTCTAAAGCAAATGGaaaagcgttctctggagtgatgaatcacacttcaccatctggcagtcctacggactaatctgggtttggcggatgccaggaggaTGCTACCTGCaccaatgtatagtgccaactgtaaagtctggtggtggaggaataatggtctggggctgtttttcatggtttgggctaggccccttagttccagtgaagggaaatcttaatgctacagcatacaatgacattctagatgattctgtgcttccaactttgtgggaacagtttggggaaggccctttcctgtttcagcatgacaatgcccccgtgcaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279856 True 560 lncRNA 0.48 1 30498015 30498574

Neighbor

gene id symbol gene type direction distance location
LOC110517711 LOC106583306 coding downstream 136245 30343960 ~ 30361770 (-)
LOC110517657 themis2 coding downstream 161843 30323757 ~ 30336172 (-)
smpdl3b smpdl3b coding downstream 193462 30298757 ~ 30304553 (-)
LOC110517624 LOC106583256 coding downstream 248115 30223261 ~ 30249900 (-)
LOC110517552 LOC106583212 coding downstream 359312 30129253 ~ 30138703 (-)
LOC110517778 LOC106583350 coding upstream 79224 30577798 ~ 30591085 (-)
LOC118951153 LOC106605099 coding upstream 93529 30592103 ~ 30593827 (-)
LOC110517847 tpi1b coding upstream 108390 30606964 ~ 30611799 (-)
gnb3a LOC106583400 coding upstream 199233 30697807 ~ 30710196 (-)
p3h3 LOC106583419 coding upstream 215332 30713906 ~ 30725406 (-)
G244607 NA non-coding downstream 54049 30443750 ~ 30443966 (-)
G244606 NA non-coding downstream 54955 30442650 ~ 30443060 (-)
G244604 NA non-coding downstream 55578 30442120 ~ 30442437 (-)
G244580 NA non-coding downstream 75032 30422762 ~ 30422983 (-)
G244577 NA non-coding downstream 79793 30417953 ~ 30418222 (-)
G245127 atp1a3 non-coding upstream 19853 30518427 ~ 30576217 (-)
G245136 NA non-coding upstream 46041 30544615 ~ 30560777 (-)
G245204 NA non-coding upstream 119321 30617895 ~ 30619600 (-)
G245219 NA non-coding upstream 143780 30642354 ~ 30652907 (-)
G245188 LOC106605095 non-coding upstream 166629 30665203 ~ 30667510 (-)
G244393 LOC106583245 other downstream 280426 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 298245 30199232 ~ 30199770 (-)
G244379 NA other downstream 320607 30174013 ~ 30177408 (-)
G244338 NA other downstream 368801 30088843 ~ 30129214 (-)
LOC110517486 LOC106583166 other downstream 1039969 29456450 ~ 29458390 (-)
G245366 LOC106605077 other upstream 446379 30944953 ~ 30945843 (-)
LOC110518371 LOC106583543 other upstream 1063971 31562384 ~ 31631107 (-)
G248239 LOC106605043 other upstream 2920855 33419429 ~ 33419707 (-)
G249485 LOC106584080 other upstream 3858701 34357275 ~ 34359451 (-)
G249978 NA other upstream 4390932 34889506 ~ 34889954 (-)

Expression


Co-expression Network