Gene
RNA
| Item | Value |
|---|---|
| gene id | G244838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 30840265 ~ 30844031 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU279517 | True | 208 | lncRNA | 0.50 | 2 | 30840265 | 30844031 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518073 | csn7a | coding | upstream | 41907 | 30787180 ~ 30798358 (+) |
| cd209 | cd209 | coding | upstream | 54524 | 30781946 ~ 30785741 (+) |
| cd4-1 | LOC100136285 | coding | upstream | 65310 | 30751387 ~ 30774955 (+) |
| cd4-2.2 | LOC100136286 | coding | upstream | 90621 | 30743021 ~ 30749644 (+) |
| LOC110518030 | LOC106583425 | coding | upstream | 97974 | 30726006 ~ 30742291 (+) |
| LOC110518162 | LOC106583467 | coding | downstream | 38071 | 30882102 ~ 30897117 (+) |
| LOC110518231 | LOC106584656 | coding | downstream | 54047 | 30898078 ~ 30902252 (+) |
| LOC110518221 | LOC106584664 | coding | downstream | 58364 | 30902395 ~ 30907005 (+) |
| LOC110518244 | LOC106583484 | coding | downstream | 73991 | 30918022 ~ 30924289 (+) |
| LOC110518266 | LOC106583495 | coding | downstream | 95290 | 30939321 ~ 31127608 (+) |
| G244831 | NA | non-coding | upstream | 16171 | 30817708 ~ 30824094 (+) |
| G244783 | NA | non-coding | upstream | 43993 | 30720530 ~ 30796272 (+) |
| G244779 | NA | non-coding | upstream | 128014 | 30711946 ~ 30712251 (+) |
| G244751 | NA | non-coding | upstream | 130162 | 30706055 ~ 30710103 (+) |
| G244768 | NA | non-coding | upstream | 142105 | 30697901 ~ 30698160 (+) |
| LOC118944663 | ubxn11 | non-coding | downstream | 5164 | 30840656 ~ 30860491 (+) |
| G244875 | NA | non-coding | downstream | 81495 | 30925526 ~ 30926079 (+) |
| G244890 | NA | non-coding | downstream | 110946 | 30954977 ~ 30955308 (+) |
| G244896 | NA | non-coding | downstream | 117307 | 30961338 ~ 30962556 (+) |
| G244691 | NA | other | upstream | 207732 | 30631770 ~ 30632533 (+) |
| G244292 | LOC106583212 | other | upstream | 702701 | 30132399 ~ 30137564 (+) |
| G243679 | LOC107756720 | other | upstream | 1149469 | 29668379 ~ 29690796 (+) |
| LOC110517275 | LOC106583018 | other | upstream | 1805551 | 28995823 ~ 29034924 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 3090539 | 27725189 ~ 27749972 (+) |
| G244851 | cep85 | other | downstream | 21535 | 30865566 ~ 30874608 (+) |
| G244956 | NA | other | downstream | 192486 | 31036517 ~ 31037252 (+) |
| G244991 | NA | other | downstream | 242738 | 31086769 ~ 31087255 (+) |
