G244851 (cep85)


Basic Information

Item Value
gene id G244851
gene name cep85
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30865566 ~ 30874608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279535
CTTTTTAAGTCTCTGCTGTTCTTCTCTCAGGCTGCTGTTCTCCCCTCGGAGTATTTCCACATCCAGGGAGGGTAACCTTGCCCCGTCCTCCAGGCCCTCCTGCACCCGCTCTTGTAAactgacacacacaaaaacaaacgaCCAAAACGGGTCATTATACAAACAGCGTAGGTTATACGAGTAGGCGTGCATGTTAAAAATCAGTGTGCATGCACACCTGGAATGCAATCATTTCAGAATGAGTGtaaagctgtgtgtgtggtagtaaAATACTTGGCCCTGGTTGGATAGCTCAGAGAGTTTCTAACCATAGCGCCAGGCttagattggtgtgtgtgtgtacctggtgacaGTGGTGAGCAGCTCCCTCTCCCTGCGTCTCTGCTCCTCCAGCTGGGTGTCCTTCTCCCGGGTGTGTGAGCGACCCTCCTCCAGACACACCTCCAGCTCTCTGACCCGGCCCTGCAGCTGGGACGCCCGCTGCTCCGTCTCCGACAGCtTTTGCTCTGGCCCTGGTAGTCCTCCATAGTGGGCAGGTCAGCGAGGTAGCGCTCCAGAGTCTCGATGCGCTGCTGCTTCTCTCGGTTCTGCTCTGCCTCCTTCTGGCACTTCTTCTTCAGGCTGTTGATGTGCTTGTCCCGGCTGCGAATCTACACACGCGCAACGTTAACTCCTCGGCGTGACTCTCGCTGGTCTCCCTCAGCGCATCGTTCAGGCGCCGCGTCTCCGCCTCCACGGCACCGAGGCGGCGCTCTGCCTCCGCCTTCTCCTGGGCGGCGCAGTCACTGCGCTCTGCAAACTGGGCCCGCAGGAAGGCATTCTCCCTCTGAGCCTCCTGCAGCCGGAGCAGACACATATCGCCGTACGGAGCGCCGCGACCGAGCAGGGCTCCGTGGACCTGCAGCTCGCTCTCCCGCAGCCGCTGCTCCAGCTGAGACATCTGCTGCTTCTGTCTCTCGATGACGagctccttctccttcagaatgcTCTCGTTGGCTTTGATCGCCGCCTCCCACTTCCTGGTCTCTGGTGGCAtggagggggtggagtagagagCAGGGTACTGGCCCACTCCAGCAGTCatcatCTGCATCTGCTCCACTTGCACACGGAGACTCTCCAGCTGCTGCttgtgctgctgttgctgctgccagCTGAGCAGCTCGCTGCATCGCTCCTGCAGCATGGGTTCATAGGCCTTGGCCTCCCTCAACAGAGCCTGGGTCTGCAGATATAGAGCGCTGGGGTACACACCTGCTGACCCAGCCACAGTTCCACCGGGCTGGCTGCTTCTCTGGCTGTAGGGGTCTGGAGCTCCGGGGACCCCTGGCCTTGTCTCGGGGAGAGCCTTGTACGAGTGCTCCATGGCACCCCTGTAGGCTTCTCCGCTGCACTCGGGAGTCACCCCCAGGCTGGTCATCTGGAGCCTGAGTCGGACGTCGGGGCAGTAGCCCGCCAGCAGGGCAGATTGGTTCATTGTGGGCTCCATGGCAGGCATGTCGAACCTCTGGCCCTCTTCCATGCAAGAGTGGTCCCCCGAGGGGAACAAAGAGTGGTCTAGTCCATTCACGAGGCTGCGGTAGCGGCTCAAGCAGTCTGGCTTGGGTCCGGCGGGGTCGGCTCCCCCCATGCCTTCTTGTGCCATGTCCAGGTTGGGGGAAGAGGCTGATTTGGAGAGGGAGGACGACTTCGAGCTGGAGGTTCCACTGGAGGTTCGGGAGCCCGAGGAGGGCCTGTGTGCCTCGGCAGAAGCCTGGGTATCTTCTTGGGAACAGGGCTGGGGCTTGGAGGCCGGTGGTCCGGCCGTGGAAGGCATGACATGGGCAGTGGGGATGGGAATCTGGCTGCGGATGGGCTGGAACGAGGGGCTGCTGCTGGAACTGCAGA

Function

symbol description
cep85 Predicted to be active in centrosome. Orthologous to human CEP85 (centrosomal protein 85).

NR:

description
centrosomal protein of 85 kDa isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279535 True 1887 TUCP 0.61 6 30865566 30874608
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118944663 ubxn11 coding upstream 5075 30840656 ~ 30860491 (+)
LOC110518073 csn7a coding upstream 67208 30787180 ~ 30798358 (+)
cd209 cd209 coding upstream 79825 30781946 ~ 30785741 (+)
cd4-1 LOC100136285 coding upstream 90611 30751387 ~ 30774955 (+)
cd4-2.2 LOC100136286 coding upstream 115922 30743021 ~ 30749644 (+)
LOC110518162 LOC106583467 coding downstream 7494 30882102 ~ 30897117 (+)
LOC110518231 LOC106584656 coding downstream 23470 30898078 ~ 30902252 (+)
LOC110518221 LOC106584664 coding downstream 27787 30902395 ~ 30907005 (+)
LOC110518244 LOC106583484 coding downstream 43414 30918022 ~ 30924289 (+)
LOC110518266 LOC106583495 coding downstream 64713 30939321 ~ 31127608 (+)
G244838 NA non-coding upstream 21535 30840265 ~ 30844031 (+)
G244831 NA non-coding upstream 41472 30817708 ~ 30824094 (+)
G244783 NA non-coding upstream 69294 30720530 ~ 30796272 (+)
G244779 NA non-coding upstream 153315 30711946 ~ 30712251 (+)
G244875 NA non-coding downstream 50918 30925526 ~ 30926079 (+)
G244890 NA non-coding downstream 80369 30954977 ~ 30955308 (+)
G244896 NA non-coding downstream 86730 30961338 ~ 30962556 (+)
G244909 NA non-coding downstream 100399 30975007 ~ 30975235 (+)
G244691 NA other upstream 233033 30631770 ~ 30632533 (+)
G244292 LOC106583212 other upstream 728002 30132399 ~ 30137564 (+)
G243679 LOC107756720 other upstream 1174770 29668379 ~ 29690796 (+)
LOC110517275 LOC106583018 other upstream 1830852 28995823 ~ 29034924 (+)
LOC110516993 LOC106605183 other upstream 3115840 27725189 ~ 27749972 (+)
G244956 NA other downstream 161909 31036517 ~ 31037252 (+)
G244991 NA other downstream 212161 31086769 ~ 31087255 (+)
G245799 NA other downstream 668045 31492207 ~ 31641357 (+)

Expression

G244851(cep85) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.25.
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G244851(cep85) Expression in each Bioproject

Bar chart with 15 bars.
G244851(cep85) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1.5.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00010855 NA coding CM030133.1 CM030133.1 2745754 ~ 2753993 (+)