G245398


Basic Information

Item Value
gene id G245398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30990862 ~ 30991368 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU280141
GTTTCAGCATCTACTATATTATGGTCAAAGTTCATACAGTATGTCTTGAGCAAGAAGCACCCAAGTGCCAGTCCCGTGTGGCATCACAGCATGTCAACCCCCCCACCCGGTCtcggatccctctggaactttcatcgcgcacacctggcccctattcccactgattgcaTTTGTATATttgtgccctttgttcaccatggtgGGGTCCattattgttccaatgtccgttggtgcgtgtgagtacctgtgctgtgtgtgttggctttcgtgcccttgtggattgccaGATGATTACGTGTCTCGTCCCgcgtgttaatcattgtgcgcgtgtgtatttattcgaggtactcctcgctcttttgtttgggtttcaaccctgtttTTCCGAtgcgtgtttgtttggtcttcgtccacgtgcctttacacggcatgCTGTCATTTGGGgcgtaataaaaaaaaatattacgcattcctgcgcctgtctcccgaatcattgTTACCAACGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280141 True 507 lncRNA 0.49 1 30990862 30991368

Neighbor

gene id symbol gene type direction distance location
LOC110518255 nr0b2 coding downstream 57702 30930661 ~ 30933160 (-)
LOC110518189 NA coding downstream 107304 30881668 ~ 30883558 (-)
LOC110518140 cep85 coding downstream 109376 30861014 ~ 30881486 (-)
LOC118951441 NA coding downstream 172760 30813299 ~ 30818102 (-)
LOC110518094 LOC106583440 coding downstream 179580 30800297 ~ 30811533 (-)
LOC110518336 zadh2 coding upstream 167058 31158426 ~ 31163476 (-)
LOC110518297 LOC106605073 coding upstream 375154 31366522 ~ 31418894 (-)
LOC110518371 LOC106583543 coding upstream 571016 31562384 ~ 31631107 (-)
LOC110518398 NA coding upstream 968675 31914252 ~ 32004356 (-)
LOC110518433 ct054 coding upstream 1250299 32241403 ~ 32246402 (-)
G245397 NA non-coding downstream 202 30990376 ~ 30990660 (-)
G245396 NA non-coding downstream 665 30989939 ~ 30990197 (-)
G245393 NA non-coding downstream 2429 30988161 ~ 30988433 (-)
G245391 NA non-coding downstream 4986 30985657 ~ 30985876 (-)
G245386 NA non-coding downstream 11604 30979018 ~ 30979258 (-)
G245401 NA non-coding upstream 2201 30993569 ~ 30994047 (-)
G245407 NA non-coding upstream 10980 31002348 ~ 31002574 (-)
G245408 NA non-coding upstream 12773 31004141 ~ 31004372 (-)
G245421 NA non-coding upstream 34797 31026165 ~ 31026409 (-)
G245422 NA non-coding upstream 35363 31026731 ~ 31026946 (-)
G245366 LOC106605077 other downstream 45019 30944953 ~ 30945843 (-)
G244393 LOC106583245 other downstream 773273 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 791092 30199232 ~ 30199770 (-)
G244379 NA other downstream 813454 30174013 ~ 30177408 (-)
G244338 NA other downstream 861648 30088843 ~ 30129214 (-)
G248239 LOC106605043 other upstream 2428061 33419429 ~ 33419707 (-)
G249485 LOC106584080 other upstream 3365907 34357275 ~ 34359451 (-)
G249978 NA other upstream 3898138 34889506 ~ 34889954 (-)
G249990 NA other upstream 3904590 34895958 ~ 34896296 (-)

Expression


Co-expression Network