G244960


Basic Information

Item Value
gene id G244960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31042761 ~ 31043058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279646
aaatgtaggggagtttttcaataacactgtgtttattttggggtttcaacatagtaaacaacagaaaagaaaatgtcaaatgttaaattttattttgggacaagctaagatgtcaatttttctgagtaggaaacataagatagaaacgggatatgggcaggatgtaagatgtgtttttaaaggattagtgaaagcaagaataaaagtagattttgagttcttttcagctgtaaaagatctcctattatttgaggagaagtgggcctacgaaggagcgctttgttttgtagaggagggg

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279646 True 298 lncRNA 0.35 1 31042761 31043058

Neighbor

gene id symbol gene type direction distance location
LOC110518244 LOC106583484 coding upstream 118472 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 137794 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 140509 30898078 ~ 30902252 (+)
LOC110518162 LOC106583467 coding upstream 145644 30882102 ~ 30897117 (+)
LOC118944663 ubxn11 coding upstream 182270 30840656 ~ 30860491 (+)
LOC110518315 LOC106583507 coding downstream 119340 31162398 ~ 31203098 (+)
LOC110518348 LOC106583530 coding downstream 430226 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 607554 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 963978 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 1107561 32150619 ~ 32229717 (+)
G244958 NA non-coding upstream 1962 31040516 ~ 31040799 (+)
G244955 NA non-coding upstream 7189 31035353 ~ 31035572 (+)
G244953 NA non-coding upstream 8718 31033796 ~ 31034043 (+)
G244946 NA non-coding upstream 15518 31027025 ~ 31027243 (+)
G244945 NA non-coding upstream 16241 31026111 ~ 31026520 (+)
G244961 NA non-coding downstream 893 31043951 ~ 31044627 (+)
G244962 NA non-coding downstream 1634 31044692 ~ 31045040 (+)
G244966 NA non-coding downstream 8303 31051361 ~ 31051637 (+)
G244967 NA non-coding downstream 12856 31055914 ~ 31056141 (+)
G244969 NA non-coding downstream 16626 31059684 ~ 31059900 (+)
G244956 NA other upstream 5509 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 168153 30865566 ~ 30874608 (+)
G244691 NA other upstream 410228 30631770 ~ 30632533 (+)
G244292 LOC106583212 other upstream 905197 30132399 ~ 30137564 (+)
G244991 NA other downstream 43711 31086769 ~ 31087255 (+)
G245799 NA other downstream 499595 31492207 ~ 31641357 (+)
G245930 NA other downstream 626900 31669958 ~ 31680640 (+)
G246282 NA other downstream 809610 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1728712 32771075 ~ 32777409 (+)

Expression


Co-expression Network