G244961


Basic Information

Item Value
gene id G244961
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31043951 ~ 31044627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279647
taaatatgggttgtatttacaatggtgtgtgttcttcactggttgcccttttctcgtggcaacaggtcacaaatcttgctgctgtgatggcacactgtggaatttcacccagtagatatgggagtttatcaaaattggatttgttttcaaattctttgtggatctgtgtaatctgagggaaatatgtctctctgatatggtcatacattgggcaggaggttaggaagtgcagctcagtttccacctcattttgtgggcagtgagcacatagcctgtcttctcttgagagccatgtctgcctacggcggcctttctcaatagcaaggctatgctcactgagtctgtacatagtcaaagctttccttaattttgggtcagtcacagtggtcaggtattctgccgctgtgtactctgtgtagggccaaatagcattctagtttgctctgtttttttttgttaattctttccaatgtgtcaagtaattatctttttgttttctcatgatttggttgggtctaattgtgctgctgtcctggggctctgtagggtgtgtttgtgtttgtgaacagagcccaagGACCAGCTTTCTtatgggactcttctccaggttcatctctctgtaggtgatggctttgttatggaaggtttgggaatcgcttccttttaggtggttatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279647 True 677 lncRNA 0.43 1 31043951 31044627

Neighbor

gene id symbol gene type direction distance location
LOC110518244 LOC106583484 coding upstream 119662 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 138984 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 141699 30898078 ~ 30902252 (+)
LOC110518162 LOC106583467 coding upstream 146834 30882102 ~ 30897117 (+)
LOC118944663 ubxn11 coding upstream 183460 30840656 ~ 30860491 (+)
LOC110518315 LOC106583507 coding downstream 117771 31162398 ~ 31203098 (+)
LOC110518348 LOC106583530 coding downstream 428657 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 605985 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 962409 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 1105992 32150619 ~ 32229717 (+)
G244960 NA non-coding upstream 893 31042761 ~ 31043058 (+)
G244958 NA non-coding upstream 3152 31040516 ~ 31040799 (+)
G244955 NA non-coding upstream 8379 31035353 ~ 31035572 (+)
G244953 NA non-coding upstream 9908 31033796 ~ 31034043 (+)
G244946 NA non-coding upstream 16708 31027025 ~ 31027243 (+)
G244962 NA non-coding downstream 65 31044692 ~ 31045040 (+)
G244966 NA non-coding downstream 6734 31051361 ~ 31051637 (+)
G244967 NA non-coding downstream 11287 31055914 ~ 31056141 (+)
G244969 NA non-coding downstream 15057 31059684 ~ 31059900 (+)
G244970 NA non-coding downstream 15638 31060265 ~ 31060496 (+)
G244956 NA other upstream 6699 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 169343 30865566 ~ 30874608 (+)
G244691 NA other upstream 411418 30631770 ~ 30632533 (+)
G244292 LOC106583212 other upstream 906387 30132399 ~ 30137564 (+)
G244991 NA other downstream 42142 31086769 ~ 31087255 (+)
G245799 NA other downstream 498026 31492207 ~ 31641357 (+)
G245930 NA other downstream 625331 31669958 ~ 31680640 (+)
G246282 NA other downstream 808041 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1727143 32771075 ~ 32777409 (+)

Expression


Co-expression Network