G244976


Basic Information

Item Value
gene id G244976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31069325 ~ 31069543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279662
TAATAAAGCTAATTTTTATGGCTCTGACAAGTATGTAATTATGTTCAGCGGTGCTTTTCAGATTTTATCACAGTCAATAAACCACACTGGCAATTTCTGTTCCTTTTGACATATTTACACGGATACATTTGATAGGAGGAATTAGTTAACTGTGAGAGCCTTGATGGATATGCACTAGTGATCTGTGACTTTTCCCTCCGCTTTCATCTGTTaatgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279662 True 219 lncRNA 0.36 1 31069325 31069543

Neighbor

gene id symbol gene type direction distance location
LOC110518244 LOC106583484 coding upstream 145036 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 164358 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 167073 30898078 ~ 30902252 (+)
LOC110518162 LOC106583467 coding upstream 172208 30882102 ~ 30897117 (+)
LOC118944663 ubxn11 coding upstream 208834 30840656 ~ 30860491 (+)
LOC110518315 LOC106583507 coding downstream 92855 31162398 ~ 31203098 (+)
LOC110518348 LOC106583530 coding downstream 403741 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 581069 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 937493 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 1081076 32150619 ~ 32229717 (+)
G244971 NA non-coding upstream 8489 31060522 ~ 31060836 (+)
G244970 NA non-coding upstream 8829 31060265 ~ 31060496 (+)
G244969 NA non-coding upstream 9425 31059684 ~ 31059900 (+)
G244967 NA non-coding upstream 13184 31055914 ~ 31056141 (+)
G244966 NA non-coding upstream 17688 31051361 ~ 31051637 (+)
G244979 NA non-coding downstream 2715 31072258 ~ 31073470 (+)
G244984 NA non-coding downstream 10982 31080525 ~ 31080826 (+)
G244985 NA non-coding downstream 11475 31081018 ~ 31081299 (+)
G244986 NA non-coding downstream 11932 31081475 ~ 31081719 (+)
G244990 NA non-coding downstream 16852 31086395 ~ 31086658 (+)
G244956 NA other upstream 32073 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 194717 30865566 ~ 30874608 (+)
G244691 NA other upstream 436792 30631770 ~ 30632533 (+)
G244292 LOC106583212 other upstream 931761 30132399 ~ 30137564 (+)
G244991 NA other downstream 17226 31086769 ~ 31087255 (+)
G245799 NA other downstream 473110 31492207 ~ 31641357 (+)
G245930 NA other downstream 600415 31669958 ~ 31680640 (+)
G246282 NA other downstream 783125 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1702227 32771075 ~ 32777409 (+)

Expression


Co-expression Network