G244979


Basic Information

Item Value
gene id G244979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31072258 ~ 31073470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279665
aagcattcaaataaaataatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaactatttatgaaaatcgcaaattaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaataatttgtgtaaaagtagctagctagcgttagcatttcgcgttagcatttagcgttagcattagcgttagcatccagcacgcaacattaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttctgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattccttgtgtattagaaatagctccgttttattcatcacatttggctaccaaaaaaaatccgaaaattcagtcctcaaaacgcgaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatgctttctcccctgaatcaaatggtaaagtagaagcagctggcaattgcgcaccgaattcgacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattcgttgcgcaatcacagccatataaggagagaatggaaaacagagcttcagaaattctgctaattcctgggtgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtcaagaatatgcatagtcgagcatattttcgtgacaaaatatcgcgcttaaaacgggaacgttttttatccaaaaatgaaatagcgcccctagagctctaacaggttaaaagcACTGTGGGGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279665 True 1213 lncRNA 0.38 1 31072258 31073470

Neighbor

gene id symbol gene type direction distance location
LOC110518244 LOC106583484 coding upstream 147969 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 167291 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 170006 30898078 ~ 30902252 (+)
LOC110518162 LOC106583467 coding upstream 175141 30882102 ~ 30897117 (+)
LOC118944663 ubxn11 coding upstream 211767 30840656 ~ 30860491 (+)
LOC110518315 LOC106583507 coding downstream 88928 31162398 ~ 31203098 (+)
LOC110518348 LOC106583530 coding downstream 399814 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 577142 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 933566 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 1077149 32150619 ~ 32229717 (+)
G244976 NA non-coding upstream 2715 31069325 ~ 31069543 (+)
G244971 NA non-coding upstream 11422 31060522 ~ 31060836 (+)
G244970 NA non-coding upstream 11762 31060265 ~ 31060496 (+)
G244969 NA non-coding upstream 12358 31059684 ~ 31059900 (+)
G244967 NA non-coding upstream 16117 31055914 ~ 31056141 (+)
G244984 NA non-coding downstream 7055 31080525 ~ 31080826 (+)
G244985 NA non-coding downstream 7548 31081018 ~ 31081299 (+)
G244986 NA non-coding downstream 8005 31081475 ~ 31081719 (+)
G244990 NA non-coding downstream 12925 31086395 ~ 31086658 (+)
G244992 NA non-coding downstream 15509 31088979 ~ 31089191 (+)
G244956 NA other upstream 35006 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 197650 30865566 ~ 30874608 (+)
G244691 NA other upstream 439725 30631770 ~ 30632533 (+)
G244292 LOC106583212 other upstream 934694 30132399 ~ 30137564 (+)
G244991 NA other downstream 13299 31086769 ~ 31087255 (+)
G245799 NA other downstream 469183 31492207 ~ 31641357 (+)
G245930 NA other downstream 596488 31669958 ~ 31680640 (+)
G246282 NA other downstream 779198 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1698300 32771075 ~ 32777409 (+)

Expression


Co-expression Network