G245454



Basic Information


Item Value
gene id G245454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31090655 ~ 31090932 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU280197
tcctaacctcctgcccaatgtatgaccatattagagagacatatttccctcagattacacagatccacaaagaattctaaaacaaatccaattttgaaaaactcccatcacagcagcaagatttgtgacctgttgccacgagaaaagggcaaccagtgaagaacacacaccattgtaaatacaacccatatttatgcttatttattttagcttgtgtcctttaaccatttgtacattgttaaaacac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU280197 True 247 lncRNA 0.37 2 31090655 31090932

Neighbor


gene id symbol gene type direction distance location
LOC110518255 nr0b2 coding downstream 157495 30930661 ~ 30933160 (-)
LOC110518189 NA coding downstream 207097 30881668 ~ 30883558 (-)
LOC110518140 cep85 coding downstream 209169 30861014 ~ 30881486 (-)
LOC118951441 NA coding downstream 272553 30813299 ~ 30818102 (-)
LOC110518094 LOC106583440 coding downstream 279373 30800297 ~ 30811533 (-)
LOC110518336 zadh2 coding upstream 67494 31158426 ~ 31163476 (-)
LOC110518297 LOC106605073 coding upstream 275590 31366522 ~ 31418894 (-)
LOC110518371 LOC106583543 coding upstream 471452 31562384 ~ 31631107 (-)
LOC110518398 NA coding upstream 869111 31914252 ~ 32004356 (-)
LOC110518433 ct054 coding upstream 1150735 32241403 ~ 32246402 (-)
G245452 NA non-coding downstream 7442 31082908 ~ 31083213 (-)
G245451 NA non-coding downstream 7958 31082455 ~ 31082697 (-)
G245448 NA non-coding downstream 10429 31080010 ~ 31080226 (-)
G245446 NA non-coding downstream 11128 31079311 ~ 31079527 (-)
G245445 NA non-coding downstream 13032 31077331 ~ 31077623 (-)
G245455 NA non-coding upstream 138 31091070 ~ 31091369 (-)
G245460 NA non-coding upstream 9377 31100309 ~ 31100621 (-)
G245468 LOC106583495 non-coding upstream 33988 31124920 ~ 31126231 (-)
G245481 NA non-coding upstream 36228 31127160 ~ 31127395 (-)
G245482 NA non-coding upstream 40815 31131747 ~ 31131964 (-)
G245366 LOC106605077 other downstream 144812 30944953 ~ 30945843 (-)
G244393 LOC106583245 other downstream 873066 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 890885 30199232 ~ 30199770 (-)
G244379 NA other downstream 913247 30174013 ~ 30177408 (-)
G244338 NA other downstream 961441 30088843 ~ 30129214 (-)
G248239 LOC106605043 other upstream 2328497 33419429 ~ 33419707 (-)
G249485 LOC106584080 other upstream 3266343 34357275 ~ 34359451 (-)
G249978 NA other upstream 3798574 34889506 ~ 34889954 (-)
G249990 NA other upstream 3805026 34895958 ~ 34896296 (-)

Expression



Co-expression Network