G245024 (LOC100136012)


Basic Information

Item Value
gene id G245024
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31204797 ~ 31205011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU279712
cctcggtctggggctccatgcaagatctcacctcgtggggcatcaatgatcatgaggaagatgagggatcagcccagaactacacggcaggacctggtcaatgacctgaagagagctgggaccacagtctcaaagaaaaccattagtaacacactacgccgtcatggattaaaatcctgcagcgcacgcaaggtccccctgctcaagccagcgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279712 True 215 lncRNA 0.55 1 31204797 31205011

Neighbor

gene id symbol gene type direction distance location
LOC110518315 LOC106583507 coding upstream 1699 31162398 ~ 31203098 (+)
LOC110518266 LOC106583495 coding upstream 77189 30939321 ~ 31127608 (+)
LOC110518244 LOC106583484 coding upstream 280508 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 299830 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 302545 30898078 ~ 30902252 (+)
LOC110518348 LOC106583530 coding downstream 268273 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 445601 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 802025 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 945608 32150619 ~ 32229717 (+)
LOC110518684 LOC106583734 coding downstream 1063638 32268649 ~ 32271705 (+)
G245022 NA non-coding upstream 44600 31158525 ~ 31160197 (+)
G245051 NA non-coding upstream 48822 31155653 ~ 31155975 (+)
G245049 NA non-coding upstream 52065 31152502 ~ 31152732 (+)
G245037 NA non-coding upstream 73680 31130852 ~ 31131117 (+)
G245552 NA non-coding downstream 65360 31270371 ~ 31270595 (+)
G245555 NA non-coding downstream 70243 31275254 ~ 31275486 (+)
G245601 LOC106583523 non-coding downstream 161510 31366521 ~ 31369680 (+)
G245784 NA non-coding downstream 255989 31461000 ~ 31461199 (+)
G245792 NA non-coding downstream 263432 31468443 ~ 31468662 (+)
G244991 NA other upstream 117542 31086769 ~ 31087255 (+)
G244956 NA other upstream 167545 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 330189 30865566 ~ 30874608 (+)
G245799 NA other downstream 337642 31492207 ~ 31641357 (+)
G245930 NA other downstream 464947 31669958 ~ 31680640 (+)
G246282 NA other downstream 647657 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1566759 32771075 ~ 32777409 (+)
G248134 NA other downstream 2218778 33423789 ~ 33424103 (+)

Expression


Co-expression Network