G245552


Basic Information

Item Value
gene id G245552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31270371 ~ 31270595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU280299
CATGGTAACAATGGCTCGTCTCCGGGGAAACGCTTAGCCTTGCACGGGTCCGTCAGACATGAAAGAGACAATTTCAGGTGGCAGAAAATGGAGCTGAATGGATTTAAAGGAAACATTTGGGGTTCTGAGGCACTCAGCATCGCCGGCGGCAACGGCTTTGATAGGAAAATGGATTCTGATCCTTGATTATATACACCACAATCTGAAACAGCCAGAACACGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280299 True 225 lncRNA 0.48 1 31270371 31270595

Neighbor

gene id symbol gene type direction distance location
LOC110518315 LOC106583507 coding upstream 67273 31162398 ~ 31203098 (+)
LOC110518266 LOC106583495 coding upstream 142763 30939321 ~ 31127608 (+)
LOC110518244 LOC106583484 coding upstream 346082 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 365404 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 368119 30898078 ~ 30902252 (+)
LOC110518348 LOC106583530 coding downstream 202689 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 380017 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 736441 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 880024 32150619 ~ 32229717 (+)
LOC110518684 LOC106583734 coding downstream 998054 32268649 ~ 32271705 (+)
G245024 LOC100136012 non-coding upstream 65360 31204797 ~ 31205011 (+)
G245022 NA non-coding upstream 110174 31158525 ~ 31160197 (+)
G245051 NA non-coding upstream 114396 31155653 ~ 31155975 (+)
G245049 NA non-coding upstream 117639 31152502 ~ 31152732 (+)
G245037 NA non-coding upstream 139254 31130852 ~ 31131117 (+)
G245555 NA non-coding downstream 4659 31275254 ~ 31275486 (+)
G245601 LOC106583523 non-coding downstream 95926 31366521 ~ 31369680 (+)
G245784 NA non-coding downstream 190405 31461000 ~ 31461199 (+)
G245792 NA non-coding downstream 197848 31468443 ~ 31468662 (+)
G245797 NA non-coding downstream 201737 31472332 ~ 31472533 (+)
G244991 NA other upstream 183116 31086769 ~ 31087255 (+)
G244956 NA other upstream 233119 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 395763 30865566 ~ 30874608 (+)
G245799 NA other downstream 272058 31492207 ~ 31641357 (+)
G245930 NA other downstream 399363 31669958 ~ 31680640 (+)
G246282 NA other downstream 582073 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1501175 32771075 ~ 32777409 (+)
G248134 NA other downstream 2153194 33423789 ~ 33424103 (+)

Expression


Co-expression Network