G245797


Basic Information

Item Value
gene id G245797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31472332 ~ 31472533 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU280556
CAAATAGACAATGATAACATATGCTAGAGGGTACAACAAATTACAGATTATACAAAGACCTTAAAAGAAACAACCATATTGATTGTTTTAACAGCTTTCCTATTAGAATAATGTAGAATGGTCTTAATGTACTGCTCGAATTCCTTATAGAAAACACGGAAGTGTTTTTTATTAGTGAATTTACATTCATGAATATGACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280556 True 202 lncRNA 0.29 1 31472332 31472533

Neighbor

gene id symbol gene type direction distance location
LOC110518315 LOC106583507 coding upstream 269234 31162398 ~ 31203098 (+)
LOC110518266 LOC106583495 coding upstream 344724 30939321 ~ 31127608 (+)
LOC110518244 LOC106583484 coding upstream 548043 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 567365 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 570080 30898078 ~ 30902252 (+)
LOC110518348 LOC106583530 coding downstream 751 31473284 ~ 31558583 (+)
LOC110518390 LOC106583575 coding downstream 178079 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 534503 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 678086 32150619 ~ 32229717 (+)
LOC110518684 LOC106583734 coding downstream 796116 32268649 ~ 32271705 (+)
G245792 NA non-coding upstream 3670 31468443 ~ 31468662 (+)
G245784 NA non-coding upstream 11133 31461000 ~ 31461199 (+)
G245601 LOC106583523 non-coding upstream 102652 31366521 ~ 31369680 (+)
G245555 NA non-coding upstream 196846 31275254 ~ 31275486 (+)
G245552 NA non-coding upstream 201737 31270371 ~ 31270595 (+)
G245820 NA non-coding downstream 10181 31482714 ~ 31520462 (+)
G245799 NA non-coding downstream 19674 31492207 ~ 31641357 (+)
G246078 NA non-coding downstream 230665 31703198 ~ 31703406 (+)
G246080 NA non-coding downstream 232335 31704868 ~ 31705337 (+)
G246101 NA non-coding downstream 249375 31721908 ~ 31722161 (+)
G244991 NA other upstream 385077 31086769 ~ 31087255 (+)
G244956 NA other upstream 435080 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 597724 30865566 ~ 30874608 (+)
G245930 NA other downstream 197425 31669958 ~ 31680640 (+)
G246282 NA other downstream 380135 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1299237 32771075 ~ 32777409 (+)
G248134 NA other downstream 1951256 33423789 ~ 33424103 (+)

Expression


Co-expression Network