G245820


Basic Information

Item Value
gene id G245820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31482714 ~ 31520462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU280596
gtagtggaggtGGAACGTTCAAGTTCCTCGGCTTACACAtcaaacaaactgaaatggtccacccacacagtcaTGGGGCGATCACTGCCTGATCACAACCCCaaaacactgctctagaggagatctgcatggaggaatgggccaaaataccagcaacagtgtgtgaaaaccctgtgaagacttacagaaaacgtgtgacctctgtcattgccaacaaagggtatataacaaagtattgagataaacttttgttattgaccaaatacttattttccaccataatttgcaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280596 True 292 lncRNA 0.42 2 31482714 31520462

Neighbor

gene id symbol gene type direction distance location
LOC110518315 LOC106583507 coding upstream 279616 31162398 ~ 31203098 (+)
LOC110518266 LOC106583495 coding upstream 355106 30939321 ~ 31127608 (+)
LOC110518244 LOC106583484 coding upstream 558425 30918022 ~ 30924289 (+)
LOC110518221 LOC106584664 coding upstream 577747 30902395 ~ 30907005 (+)
LOC110518231 LOC106584656 coding upstream 580462 30898078 ~ 30902252 (+)
LOC110518390 LOC106583575 coding downstream 130150 31650612 ~ 31660620 (+)
LOC110518407 LOC106583590 coding downstream 486574 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 630157 32150619 ~ 32229717 (+)
LOC110518684 LOC106583734 coding downstream 748187 32268649 ~ 32271705 (+)
LOC110518706 LOC106583752 coding downstream 1127949 32648411 ~ 32711431 (+)
G245797 NA non-coding upstream 10181 31472332 ~ 31472533 (+)
G245792 NA non-coding upstream 14052 31468443 ~ 31468662 (+)
G245784 NA non-coding upstream 21515 31461000 ~ 31461199 (+)
G245601 LOC106583523 non-coding upstream 113034 31366521 ~ 31369680 (+)
G245555 NA non-coding upstream 207228 31275254 ~ 31275486 (+)
G246078 NA non-coding downstream 182736 31703198 ~ 31703406 (+)
G246080 NA non-coding downstream 184406 31704868 ~ 31705337 (+)
G246101 NA non-coding downstream 201446 31721908 ~ 31722161 (+)
G246123 NA non-coding downstream 215169 31735631 ~ 31735864 (+)
G246132 NA non-coding downstream 220631 31741093 ~ 31741339 (+)
G244991 NA other upstream 395459 31086769 ~ 31087255 (+)
G244956 NA other upstream 445462 31036517 ~ 31037252 (+)
G244851 cep85 other upstream 608106 30865566 ~ 30874608 (+)
G245799 NA other downstream 22191 31492207 ~ 31641357 (+)
G245930 NA other downstream 149496 31669958 ~ 31680640 (+)
G246282 NA other downstream 332206 31852668 ~ 31859319 (+)
LOC110518733 LOC106583759 other downstream 1251308 32771075 ~ 32777409 (+)
G248134 NA other downstream 1903327 33423789 ~ 33424103 (+)

Expression


Co-expression Network