G246080


Basic Information

Item Value
gene id G246080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 31704868 ~ 31705337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU280878
tttttttatttttatttatttattttacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacagatacaacaacacagagttacacatggagtaaaacaaacatacagtcaataataaagtataaacaagtctatatacaatgtgagcaaatgaggtgagaagggaagtaaaggcaaaaaaaggccttggtggcaaggtaaatacaatatagcaagtaaaacactggaatggtagttttgcaatggaagaatgtgcaaagtagaaataaaaataatggggtgcaaaggagcaaaataaataaataaattaaatacagttgggaaagaggtagttgatagggctaaattataggtgggctatgtacaggtgcagtaatctgtgagctgctctgacagttggtgcttaaagctagtgagggag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280878 True 470 lncRNA 0.35 1 31704868 31705337

Neighbor

gene id symbol gene type direction distance location
LOC110518390 LOC106583575 coding upstream 44248 31650612 ~ 31660620 (+)
LOC110518348 LOC106583530 coding upstream 146285 31473284 ~ 31558583 (+)
LOC110518315 LOC106583507 coding upstream 501770 31162398 ~ 31203098 (+)
LOC110518266 LOC106583495 coding upstream 577260 30939321 ~ 31127608 (+)
LOC110518244 LOC106583484 coding upstream 780579 30918022 ~ 30924289 (+)
LOC110518407 LOC106583590 coding downstream 301699 32007036 ~ 32024542 (+)
LOC110518416 LOC106583607 coding downstream 445282 32150619 ~ 32229717 (+)
LOC110518684 LOC106583734 coding downstream 563312 32268649 ~ 32271705 (+)
LOC110518706 LOC106583752 coding downstream 943074 32648411 ~ 32711431 (+)
LOC110518733 LOC106583759 coding downstream 1065738 32771075 ~ 32777409 (+)
G246078 NA non-coding upstream 1462 31703198 ~ 31703406 (+)
G245799 NA non-coding upstream 63511 31492207 ~ 31641357 (+)
G245820 NA non-coding upstream 184406 31482714 ~ 31520462 (+)
G245797 NA non-coding upstream 232335 31472332 ~ 31472533 (+)
G245792 NA non-coding upstream 236206 31468443 ~ 31468662 (+)
G246101 NA non-coding downstream 16571 31721908 ~ 31722161 (+)
G246123 NA non-coding downstream 30294 31735631 ~ 31735864 (+)
G246132 NA non-coding downstream 35756 31741093 ~ 31741339 (+)
G246136 NA non-coding downstream 39985 31745322 ~ 31745965 (+)
G246159 NA non-coding downstream 53969 31759306 ~ 31759567 (+)
G245930 NA other upstream 24228 31669958 ~ 31680640 (+)
G246282 NA other downstream 147331 31852668 ~ 31859319 (+)
G248134 NA other downstream 1718452 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 2122883 33828220 ~ 33835275 (+)
G248794 NA other downstream 2269139 33974476 ~ 33977835 (+)

Expression


Co-expression Network