G246858


Basic Information

Item Value
gene id G246858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 32482313 ~ 32482698 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU281708
CAGCTTGCTGCTTTACGGGCTCCTGTCAAATAGCCATGAATGCGGGTGTCCATACAACTTCGCTGCAACCGAAACAAATGCACTTGCTCCCTGTCAACGACCGTGCTTGCATGTGTAACGTTTCAATAGCCACTCCTTTTCAGGAGGCAGGGTATGAGACGAGCCGAATTGCAGAATCTGCAGTCCTCTAACGGTACTATGTACCCTCGGCGCATTTATGAATGTGAACGTCTCCTTCGCTCTCACTCACCATCCCCTTCCGCGTCTGTTGTTGGATTTAAACGTTAACCGATAGAGAATATTACAAATATATACCCCTTTCATCATTTAGAGATGGAGGCAGAAGATTAGACTTCATTGCGAGGTACGACACGCTCGGGAGCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281708 True 386 lncRNA 0.48 1 32482313 32482698

Neighbor

gene id symbol gene type direction distance location
LOC110518684 LOC106583734 coding upstream 210608 32268649 ~ 32271705 (+)
LOC110518416 LOC106583607 coding upstream 252596 32150619 ~ 32229717 (+)
LOC110518407 LOC106583590 coding upstream 457771 32007036 ~ 32024542 (+)
LOC110518390 LOC106583575 coding upstream 821693 31650612 ~ 31660620 (+)
LOC110518348 LOC106583530 coding upstream 923730 31473284 ~ 31558583 (+)
LOC110518706 LOC106583752 coding downstream 165713 32648411 ~ 32711431 (+)
LOC110518733 LOC106583759 coding downstream 288377 32771075 ~ 32777409 (+)
LOC110518743 eny2 coding downstream 368211 32850909 ~ 32852805 (+)
LOC110518767 NA coding downstream 536713 33019411 ~ 33035356 (+)
LOC110518846 LOC106583830 coding downstream 575198 33057896 ~ 33068611 (+)
G246857 NA non-coding upstream 480 32481439 ~ 32481833 (+)
G246853 NA non-coding upstream 5364 32476697 ~ 32476949 (+)
G246852 NA non-coding upstream 6552 32475454 ~ 32475761 (+)
G246851 NA non-coding upstream 6967 32475146 ~ 32475346 (+)
G246850 NA non-coding upstream 8645 32473377 ~ 32473668 (+)
G247160 NA non-coding downstream 112757 32595455 ~ 32595883 (+)
G247131 LOC106605059 non-coding downstream 114158 32596856 ~ 32638188 (+)
G247381 NA non-coding downstream 230791 32713489 ~ 32713732 (+)
G247392 NA non-coding downstream 238834 32721532 ~ 32721797 (+)
G247393 NA non-coding downstream 239329 32722027 ~ 32722293 (+)
G246282 NA other upstream 622994 31852668 ~ 31859319 (+)
G245930 NA other upstream 801673 31669958 ~ 31680640 (+)
G245799 NA other upstream 857270 31492207 ~ 31641357 (+)
G244991 NA other upstream 1395058 31086769 ~ 31087255 (+)
G244956 NA other upstream 1445061 31036517 ~ 31037252 (+)
G248134 NA other downstream 941091 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 1345522 33828220 ~ 33835275 (+)
G248794 NA other downstream 1491778 33974476 ~ 33977835 (+)
G248795 NA other downstream 1523460 34006158 ~ 34013057 (+)

Expression


Co-expression Network