G247160


Basic Information

Item Value
gene id G247160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 32595455 ~ 32595883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU282040
TTAGGAAATGACTGAGGCCCAGTCGTTACAGATTGGTGTAATGCATATGGTACGCTCCAAACGTAGTCCTTGTATATAAAGCACACATCTAAACCTTGGATGTTTTCTTTTTGAAAAGCCAGAGGTCAATTCAGTCCGACCTGTCGGCTTTGTAGTGAAAACATTCAAATATAGCCATGGAACAGAGCATGATTAAACATGTTTGTAGATAATGGAAAGAGGAGCAGCATCATATAGGAATACCATTCCAGAGAAAACCAGAGACCTTCCATGACATTTTGTCACACTGGTTTTATACAAGACAAGCGTTCTAACCTCAAGCAATAAAAAGACAATGTAAGTCTTCCATTTCATCACTGGGACCGCTTGCAAACCTTTTGTGGGGGGGAAAACCTTGGGACAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282040 True 406 lncRNA 0.40 2 32595455 32595883

Neighbor

gene id symbol gene type direction distance location
LOC110518684 LOC106583734 coding upstream 323750 32268649 ~ 32271705 (+)
LOC110518416 LOC106583607 coding upstream 365738 32150619 ~ 32229717 (+)
LOC110518407 LOC106583590 coding upstream 570913 32007036 ~ 32024542 (+)
LOC110518390 LOC106583575 coding upstream 934835 31650612 ~ 31660620 (+)
LOC110518348 LOC106583530 coding upstream 1036872 31473284 ~ 31558583 (+)
LOC110518706 LOC106583752 coding downstream 52528 32648411 ~ 32711431 (+)
LOC110518733 LOC106583759 coding downstream 175192 32771075 ~ 32777409 (+)
LOC110518743 eny2 coding downstream 255026 32850909 ~ 32852805 (+)
LOC110518767 NA coding downstream 423528 33019411 ~ 33035356 (+)
LOC110518846 LOC106583830 coding downstream 462013 33057896 ~ 33068611 (+)
G246858 NA non-coding upstream 112757 32482313 ~ 32482698 (+)
G246857 NA non-coding upstream 113622 32481439 ~ 32481833 (+)
G246853 NA non-coding upstream 118506 32476697 ~ 32476949 (+)
G246852 NA non-coding upstream 119694 32475454 ~ 32475761 (+)
G246851 NA non-coding upstream 120109 32475146 ~ 32475346 (+)
G247131 LOC106605059 non-coding downstream 973 32596856 ~ 32638188 (+)
G247381 NA non-coding downstream 117606 32713489 ~ 32713732 (+)
G247392 NA non-coding downstream 125649 32721532 ~ 32721797 (+)
G247393 NA non-coding downstream 126144 32722027 ~ 32722293 (+)
G247402 NA non-coding downstream 132802 32728685 ~ 32728972 (+)
G246282 NA other upstream 736136 31852668 ~ 31859319 (+)
G245930 NA other upstream 914815 31669958 ~ 31680640 (+)
G245799 NA other upstream 970412 31492207 ~ 31641357 (+)
G244991 NA other upstream 1508200 31086769 ~ 31087255 (+)
G244956 NA other upstream 1558203 31036517 ~ 31037252 (+)
G248134 NA other downstream 827906 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 1232337 33828220 ~ 33835275 (+)
G248794 NA other downstream 1378593 33974476 ~ 33977835 (+)
G248795 NA other downstream 1410275 34006158 ~ 34013057 (+)

Expression


Co-expression Network