G247580


Basic Information

Item Value
gene id G247580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 32892193 ~ 32892437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU282484
gtaaggagATTATTGTTTGTACAATGAACACGACACTTCTAGGAACTTACACATTTTTGCTGCTTTCATAACACCAGAAGTGCAACTGAGCGATAGCATGTGAAGCAATCTTCCCTCAACAGAATAAGACAAAATTGTACAGCATTATACATATCTATCCATTCAGGGATGTTAGAGTTGCCGAAGCTCTTTTGTGAGGTCCCTTACATAGAAACATGAGAATTAAACATCAGTTCAGCTGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282484 True 245 lncRNA 0.38 1 32892193 32892437

Neighbor

gene id symbol gene type direction distance location
LOC110518743 eny2 coding upstream 39388 32850909 ~ 32852805 (+)
LOC110518733 LOC106583759 coding upstream 114784 32771075 ~ 32777409 (+)
LOC110518706 LOC106583752 coding upstream 180762 32648411 ~ 32711431 (+)
LOC110518684 LOC106583734 coding upstream 620488 32268649 ~ 32271705 (+)
LOC110518416 LOC106583607 coding upstream 662476 32150619 ~ 32229717 (+)
LOC110518767 NA coding downstream 126974 33019411 ~ 33035356 (+)
LOC110518846 LOC106583830 coding downstream 165459 33057896 ~ 33068611 (+)
LOC110518871 LOC100194712 coding downstream 194072 33086509 ~ 33172715 (+)
tpbgb LOC106583879 coding downstream 448930 33341367 ~ 33344522 (+)
LOC110518918 LOC106583887 coding downstream 509413 33401850 ~ 33442397 (+)
G247574 NA non-coding upstream 9056 32882916 ~ 32883137 (+)
G247541 NA non-coding upstream 56563 32835431 ~ 32835630 (+)
G247481 NA non-coding upstream 98656 32793334 ~ 32793537 (+)
G247453 NA non-coding upstream 111468 32779533 ~ 32780725 (+)
G247680 NA non-coding downstream 85108 32977545 ~ 32992448 (+)
G247681 NA non-coding downstream 86132 32978569 ~ 32993640 (+)
G247682 NA non-coding downstream 99557 32991994 ~ 32994017 (+)
G247986 NA non-coding downstream 314247 33206684 ~ 33206889 (+)
G247993 NA non-coding downstream 319130 33211567 ~ 33211936 (+)
G246282 NA other upstream 1032874 31852668 ~ 31859319 (+)
G245930 NA other upstream 1211553 31669958 ~ 31680640 (+)
G245799 NA other upstream 1267150 31492207 ~ 31641357 (+)
G244991 NA other upstream 1804938 31086769 ~ 31087255 (+)
G248134 NA other downstream 531352 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 935783 33828220 ~ 33835275 (+)
G248794 NA other downstream 1082039 33974476 ~ 33977835 (+)
G248795 NA other downstream 1113721 34006158 ~ 34013057 (+)
G249245 NA other downstream 1410135 34302572 ~ 34302907 (+)

Expression


Co-expression Network