G247795


Basic Information

Item Value
gene id G247795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 32977539 ~ 32992435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU282723
caacagtgtctcggacctgcctggtgtgttccttgttcttcgtgatgctctctgcgcttttggcggacctctgagactatcacagtgcaggtgcatttgtacggagacttgattacacacaggtggattgtatttgtcATCATTGGTCATTTGGGTCAGCATTGGATCGTTCGGAGATCCtcgctgaacttctggagagagtttgctgcactgaaagtgggGGGGCTGGGTGGTTTTGCacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatcc
>TU282725
caacagtgtctcggacctgcctggtgtgttccttgttcttcgtgatgctctctgcgcttttggcggacctctgagactatcacagtgcaggtgcatttgtacggagacttgattacacacaggtggattgtatttgtcATCATTGGTCATTTGGGTCAGCATTGGATCGTTCGGAGATCCtcgctgaacttctggagagagtttgctgcactgaaagtgggGGGGCTGaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatcc
>TU282726
caacagtgtctcggacctgcctggtgtgttccttgttcttcgtgatgctctctgcgcttttggcggacctctgagactatcacagtgcaggtgcatttgtacggagacttgattacacacaggtggattgtatttgtcATCATTGGTCATTTGGGTCAGCATTGGATCGTTCGGAGATCCtcgctgaacttctggagagagtttgctgcactgaaagtgggGGGGCTGGGTGGTTTTGCCCGCTTAATTTTTCGTTTTTTGATTTGTTGGAGGGGTTTGGGGTGTCCGGTGGATGTCGTTCCGcttcatggttgtgtcccacttgttgttgattcttcacggAGGGATACGGTTTTGTGTCTTTGTGTTTGGGGCCTGGGGTGTGGCGGGGGGTCGCGGGGTTCGGGGGGGCCGAgtgctttcgcaaggcactgtatataggtcTTTGT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282723 False 287 lncRNA 0.47 2 32977539 32992435
TU282725 False 287 lncRNA 0.46 2 32977539 32992435
TU282726 True 449 lncRNA 0.52 2 32986358 32992435

Neighbor

gene id symbol gene type direction distance location
LOC110518723 tmm74 coding downstream 216644 32757693 ~ 32760895 (-)
if36 if36 coding downstream 339415 32596856 ~ 32638124 (-)
LOC110518696 LOC106583742 coding downstream 383044 32513177 ~ 32594495 (-)
LOC110518458 NA coding downstream 517524 32299848 ~ 32460015 (-)
macf1b LOC106583729 coding downstream 680558 32254746 ~ 32296981 (-)
LOC110518755 LOC106583774 coding upstream 13733 33006168 ~ 33013361 (-)
LOC110518858 LOC106583820 coding upstream 49238 33041673 ~ 33057433 (-)
LOC110518882 LOC106583857 coding upstream 285547 33277982 ~ 33284779 (-)
LOC118964365 NA coding upstream 293777 33286212 ~ 33286264 (-)
LOC110518895 LOC106583864 coding upstream 308680 33301115 ~ 33337241 (-)
G247657 NA non-coding downstream 46039 32931275 ~ 32931500 (-)
G247630 NA non-coding downstream 69611 32907722 ~ 32907928 (-)
G247628 NA non-coding downstream 70127 32907209 ~ 32907412 (-)
G247627 NA non-coding downstream 72002 32905331 ~ 32905537 (-)
G247626 NA non-coding downstream 73263 32904032 ~ 32904276 (-)
G247787 NA non-coding upstream 27151 33019586 ~ 33021621 (-)
G247847 NA non-coding upstream 43765 33036200 ~ 33036500 (-)
G247855 NA non-coding upstream 55200 33047635 ~ 33048593 (-)
G247868 LOC106583830 non-coding upstream 73409 33065844 ~ 33067704 (-)
G247994 NA non-coding upstream 219045 33211480 ~ 33211791 (-)
LOC110518371 LOC106583543 other downstream 1396337 31562384 ~ 31631107 (-)
G245366 LOC106605077 other downstream 2031696 30944953 ~ 30945843 (-)
G244393 LOC106583245 other downstream 2759950 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 2777769 30199232 ~ 30199770 (-)
G244379 NA other downstream 2800131 30174013 ~ 30177408 (-)
G248239 LOC106605043 other upstream 426994 33419429 ~ 33419707 (-)
G249485 LOC106584080 other upstream 1364840 34357275 ~ 34359451 (-)
G249978 NA other upstream 1897071 34889506 ~ 34889954 (-)
G249990 NA other upstream 1903523 34895958 ~ 34896296 (-)
G251462 LOC106584332 other upstream 3147677 36140112 ~ 36144572 (-)

Expression


Co-expression Network