G248006


Basic Information

Item Value
gene id G248006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33217109 ~ 33217352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU282953
TCAGTGACTCCTTAGGAACCTCCCCATCTCCTGGTTGGTCCTCTCCACATGCCCGTTAGGCCGAATGTGAGGCTGACCGTGGCCCCCAGCTTCTCAAAGGCTTTCCAGACCTGCGATGTGAATTGGAGACCACGGTCGTTAAACAATGTCCTCCAGAAAACCTGCTGGAATTGTGCCTCAGCAACCTGGAGAGTGGTAGAGGAGAACGGTAGAGGAGATCCGTTACAAAgtctatggacagatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282953 True 244 lncRNA 0.53 1 33217109 33217352

Neighbor

gene id symbol gene type direction distance location
LOC110518871 LOC100194712 coding upstream 44394 33086509 ~ 33172715 (+)
LOC110518846 LOC106583830 coding upstream 148498 33057896 ~ 33068611 (+)
LOC110518767 NA coding upstream 181753 33019411 ~ 33035356 (+)
LOC110518743 eny2 coding upstream 364304 32850909 ~ 32852805 (+)
LOC110518733 LOC106583759 coding upstream 439700 32771075 ~ 32777409 (+)
tpbgb LOC106583879 coding downstream 124015 33341367 ~ 33344522 (+)
LOC110518918 LOC106583887 coding downstream 184498 33401850 ~ 33442397 (+)
snap91a LOC106583925 coding downstream 233089 33450441 ~ 33559250 (+)
me1 LOC106583951 coding downstream 315533 33532885 ~ 33653066 (+)
LOC110504028 LOC106604995 coding downstream 448205 33665557 ~ 33702310 (+)
G247993 NA non-coding upstream 5173 33211567 ~ 33211936 (+)
G247986 NA non-coding upstream 10220 33206684 ~ 33206889 (+)
G247682 NA non-coding upstream 223092 32991994 ~ 32994017 (+)
G247681 NA non-coding upstream 223469 32978569 ~ 32993640 (+)
G247680 NA non-coding upstream 224661 32977545 ~ 32992448 (+)
G248007 NA non-coding downstream 111 33217463 ~ 33217694 (+)
G248016 NA non-coding downstream 12352 33229704 ~ 33230060 (+)
G248028 NA non-coding downstream 26703 33244055 ~ 33244261 (+)
G248029 NA non-coding downstream 30000 33247352 ~ 33247797 (+)
G248061 NA non-coding downstream 80806 33298158 ~ 33298382 (+)
G246282 NA other upstream 1357790 31852668 ~ 31859319 (+)
G245930 NA other upstream 1536469 31669958 ~ 31680640 (+)
G245799 NA other upstream 1592066 31492207 ~ 31641357 (+)
G244991 NA other upstream 2129854 31086769 ~ 31087255 (+)
G248134 NA other downstream 206437 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 610868 33828220 ~ 33835275 (+)
G248794 NA other downstream 757124 33974476 ~ 33977835 (+)
G248795 NA other downstream 788806 34006158 ~ 34013057 (+)
G249245 NA other downstream 1085220 34302572 ~ 34302907 (+)

Expression


Co-expression Network