G248016


Basic Information

Item Value
gene id G248016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33229704 ~ 33230060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU282963
tccttgaggtatttctacaacttgattggagtccacctgtggaaaattaaattgattggacatgatttggaaaggcacacataaggtcccacagttgacaatgcatgtcagaacaaaaaccaagccatgaggtcgaaggaattgtccgtcgagctccgagacagaattgtgtcgaggcacagatctggggaagggtagcaaaaaaaacccatctctgcagcactccaccaatcaggcttttatggtagagtggccagacggaagccactcgtcagtaaaaggtacatgacagcctgcttggagtttgccaaaaggcacctaagattctctggtctgatgaacccaagattgaactcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282963 True 357 lncRNA 0.46 1 33229704 33230060

Neighbor

gene id symbol gene type direction distance location
LOC110518871 LOC100194712 coding upstream 56989 33086509 ~ 33172715 (+)
LOC110518846 LOC106583830 coding upstream 161093 33057896 ~ 33068611 (+)
LOC110518767 NA coding upstream 194348 33019411 ~ 33035356 (+)
LOC110518743 eny2 coding upstream 376899 32850909 ~ 32852805 (+)
LOC110518733 LOC106583759 coding upstream 452295 32771075 ~ 32777409 (+)
tpbgb LOC106583879 coding downstream 111307 33341367 ~ 33344522 (+)
LOC110518918 LOC106583887 coding downstream 171790 33401850 ~ 33442397 (+)
snap91a LOC106583925 coding downstream 220381 33450441 ~ 33559250 (+)
me1 LOC106583951 coding downstream 302825 33532885 ~ 33653066 (+)
LOC110504028 LOC106604995 coding downstream 435497 33665557 ~ 33702310 (+)
G248007 NA non-coding upstream 12010 33217463 ~ 33217694 (+)
G248006 NA non-coding upstream 12352 33217109 ~ 33217352 (+)
G247993 NA non-coding upstream 17768 33211567 ~ 33211936 (+)
G247986 NA non-coding upstream 22815 33206684 ~ 33206889 (+)
G247682 NA non-coding upstream 235687 32991994 ~ 32994017 (+)
G248028 NA non-coding downstream 13995 33244055 ~ 33244261 (+)
G248029 NA non-coding downstream 17292 33247352 ~ 33247797 (+)
G248061 NA non-coding downstream 68098 33298158 ~ 33298382 (+)
G248069 LOC106583864 non-coding downstream 90303 33320363 ~ 33321442 (+)
G248080 NA non-coding downstream 117494 33347554 ~ 33347893 (+)
G246282 NA other upstream 1370385 31852668 ~ 31859319 (+)
G245930 NA other upstream 1549064 31669958 ~ 31680640 (+)
G245799 NA other upstream 1604661 31492207 ~ 31641357 (+)
G244991 NA other upstream 2142449 31086769 ~ 31087255 (+)
G248134 NA other downstream 193729 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 598160 33828220 ~ 33835275 (+)
G248794 NA other downstream 744416 33974476 ~ 33977835 (+)
G248795 NA other downstream 776098 34006158 ~ 34013057 (+)
G249245 NA other downstream 1072512 34302572 ~ 34302907 (+)

Expression


Co-expression Network