Gene
RNA
| Item | Value |
|---|---|
| gene id | G248235 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 33414680 ~ 33414972 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU283198 | True | 293 | lncRNA | 0.42 | 1 | 33414680 | 33414972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ube3d | ube3d | coding | downstream | 12808 | 33382980 ~ 33401872 (-) |
| LOC110518895 | LOC106583864 | coding | downstream | 77439 | 33301115 ~ 33337241 (-) |
| LOC118964365 | NA | coding | downstream | 128416 | 33286212 ~ 33286264 (-) |
| LOC110518882 | LOC106583857 | coding | downstream | 129901 | 33277982 ~ 33284779 (-) |
| LOC110518858 | LOC106583820 | coding | downstream | 357247 | 33041673 ~ 33057433 (-) |
| prss35 | LOC106583947 | coding | upstream | 92622 | 33507594 ~ 33513383 (-) |
| prdm13 | LOC106583971 | coding | upstream | 395673 | 33810645 ~ 33818250 (-) |
| zgc:172323 | LOC106583978 | coding | upstream | 413251 | 33828223 ~ 33835034 (-) |
| tstd3 | hs6b | coding | upstream | 423990 | 33838962 ~ 33844810 (-) |
| LOC110519190 | NA | coding | upstream | 630631 | 34045603 ~ 34046368 (-) |
| G248234 | NA | non-coding | downstream | 64 | 33414402 ~ 33414616 (-) |
| G248231 | LOC106583887 | non-coding | downstream | 9317 | 33405000 ~ 33405363 (-) |
| G248229 | NA | non-coding | downstream | 11783 | 33402635 ~ 33402897 (-) |
| G248215 | NA | non-coding | downstream | 12422 | 33401945 ~ 33402258 (-) |
| G248213 | NA | non-coding | downstream | 32935 | 33381543 ~ 33381745 (-) |
| G248237 | LOC106583887 | non-coding | upstream | 1734 | 33416706 ~ 33416918 (-) |
| G248238 | LOC106583887 | non-coding | upstream | 3708 | 33418680 ~ 33419167 (-) |
| G248240 | NA | non-coding | upstream | 5022 | 33419994 ~ 33420249 (-) |
| G248242 | NA | non-coding | upstream | 8822 | 33423794 ~ 33424143 (-) |
| G248243 | LOC106583887 | non-coding | upstream | 9760 | 33424732 ~ 33425056 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 1833478 | 31562384 ~ 31631107 (-) |
| G245366 | LOC106605077 | other | downstream | 2468837 | 30944953 ~ 30945843 (-) |
| G244393 | LOC106583245 | other | downstream | 3197091 | 30211570 ~ 30217682 (-) |
| G244381 | LOC106583245 | other | downstream | 3214910 | 30199232 ~ 30199770 (-) |
| G244379 | NA | other | downstream | 3237272 | 30174013 ~ 30177408 (-) |
| G248239 | LOC106605043 | other | upstream | 4457 | 33419429 ~ 33419707 (-) |
| G249485 | LOC106584080 | other | upstream | 942303 | 34357275 ~ 34359451 (-) |
| G249978 | NA | other | upstream | 1474534 | 34889506 ~ 34889954 (-) |
| G249990 | NA | other | upstream | 1480986 | 34895958 ~ 34896296 (-) |
| G251462 | LOC106584332 | other | upstream | 2725140 | 36140112 ~ 36144572 (-) |
