G248130


Basic Information

Item Value
gene id G248130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33417329 ~ 33417641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU283084
GTCTCTGAGTGTTTGGTTGATCATAAAAGAAAACGTTTCCTTTTATCTCTGAACAGAATGTGAAATCCATGCGAAGGTTAAATCGTTTTTGCCTTTTGTCTTTGTCCAGCGGAGATGAAATGGAACCAAATTATGTTCAAAAGCAAACATACTTCCCCCTACACACCCACGTTCATTGATTCTCACTTTGAAAATTAAAACTTTGTCCATCTTTCAGTTCCAAGCTGATGACTGACTACCTTTGATAGTACACGAATGTCACTTCTTTCACTTCCTGCCAAATAAAATCATCAGAGCAGGGTTCCTCTGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283084 True 313 lncRNA 0.38 1 33417329 33417641

Neighbor

gene id symbol gene type direction distance location
tpbgb LOC106583879 coding upstream 72807 33341367 ~ 33344522 (+)
LOC110518871 LOC100194712 coding upstream 244614 33086509 ~ 33172715 (+)
LOC110518846 LOC106583830 coding upstream 348718 33057896 ~ 33068611 (+)
LOC110518767 NA coding upstream 381973 33019411 ~ 33035356 (+)
LOC110518743 eny2 coding upstream 564524 32850909 ~ 32852805 (+)
snap91a LOC106583925 coding downstream 32800 33450441 ~ 33559250 (+)
me1 LOC106583951 coding downstream 115244 33532885 ~ 33653066 (+)
LOC110504028 LOC106604995 coding downstream 247916 33665557 ~ 33702310 (+)
usp45 LOC106583983 coding downstream 428605 33846246 ~ 33894315 (+)
pnisr pnisr coding downstream 481233 33898874 ~ 33907094 (+)
G248120 ube3d non-coding upstream 22123 33394474 ~ 33395206 (+)
G248113 NA non-coding upstream 34631 33382466 ~ 33382698 (+)
G248112 NA non-coding upstream 35183 33381853 ~ 33382146 (+)
G248111 NA non-coding upstream 35593 33381518 ~ 33381736 (+)
G248090 NA non-coding upstream 64050 33353044 ~ 33353279 (+)
G248552 NA non-coding downstream 257387 33675028 ~ 33675236 (+)
G248619 NA non-coding downstream 314625 33732266 ~ 33732501 (+)
G248624 NA non-coding downstream 317790 33735431 ~ 33735763 (+)
LOC110518733 LOC106583759 other upstream 641542 32771075 ~ 32777409 (+)
G246282 NA other upstream 1558010 31852668 ~ 31859319 (+)
G245930 NA other upstream 1736689 31669958 ~ 31680640 (+)
G245799 NA other upstream 1792286 31492207 ~ 31641357 (+)
G244991 NA other upstream 2330074 31086769 ~ 31087255 (+)
G248134 NA other downstream 6148 33423789 ~ 33424103 (+)
G248750 LOC106583978 other downstream 410579 33828220 ~ 33835275 (+)
G248794 NA other downstream 556835 33974476 ~ 33977835 (+)
G248795 NA other downstream 588517 34006158 ~ 34013057 (+)
G249245 NA other downstream 884931 34302572 ~ 34302907 (+)

Expression


Co-expression Network