Gene
RNA
| Item | Value |
|---|---|
| gene id | G248238 |
| gene name | LOC106583887 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 33418680 ~ 33419167 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein dopey-1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU283201 | True | 488 | lncRNA | 0.63 | 1 | 33418680 | 33419167 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ube3d | ube3d | coding | downstream | 16808 | 33382980 ~ 33401872 (-) |
| LOC110518895 | LOC106583864 | coding | downstream | 81439 | 33301115 ~ 33337241 (-) |
| LOC118964365 | NA | coding | downstream | 132416 | 33286212 ~ 33286264 (-) |
| LOC110518882 | LOC106583857 | coding | downstream | 133901 | 33277982 ~ 33284779 (-) |
| LOC110518858 | LOC106583820 | coding | downstream | 361247 | 33041673 ~ 33057433 (-) |
| prss35 | LOC106583947 | coding | upstream | 88427 | 33507594 ~ 33513383 (-) |
| prdm13 | LOC106583971 | coding | upstream | 391478 | 33810645 ~ 33818250 (-) |
| zgc:172323 | LOC106583978 | coding | upstream | 409056 | 33828223 ~ 33835034 (-) |
| tstd3 | hs6b | coding | upstream | 419795 | 33838962 ~ 33844810 (-) |
| LOC110519190 | NA | coding | upstream | 626436 | 34045603 ~ 34046368 (-) |
| G248237 | LOC106583887 | non-coding | downstream | 1762 | 33416706 ~ 33416918 (-) |
| G248235 | NA | non-coding | downstream | 3708 | 33414680 ~ 33414972 (-) |
| G248234 | NA | non-coding | downstream | 4064 | 33414402 ~ 33414616 (-) |
| G248231 | LOC106583887 | non-coding | downstream | 13317 | 33405000 ~ 33405363 (-) |
| G248229 | NA | non-coding | downstream | 15783 | 33402635 ~ 33402897 (-) |
| G248240 | NA | non-coding | upstream | 827 | 33419994 ~ 33420249 (-) |
| G248242 | NA | non-coding | upstream | 4627 | 33423794 ~ 33424143 (-) |
| G248243 | LOC106583887 | non-coding | upstream | 5565 | 33424732 ~ 33425056 (-) |
| G248256 | NA | non-coding | upstream | 23557 | 33442724 ~ 33442934 (-) |
| G248265 | NA | non-coding | upstream | 30071 | 33449238 ~ 33449493 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 1837478 | 31562384 ~ 31631107 (-) |
| G245366 | LOC106605077 | other | downstream | 2472837 | 30944953 ~ 30945843 (-) |
| G244393 | LOC106583245 | other | downstream | 3201091 | 30211570 ~ 30217682 (-) |
| G244381 | LOC106583245 | other | downstream | 3218910 | 30199232 ~ 30199770 (-) |
| G244379 | NA | other | downstream | 3241272 | 30174013 ~ 30177408 (-) |
| G248239 | LOC106605043 | other | upstream | 262 | 33419429 ~ 33419707 (-) |
| G249485 | LOC106584080 | other | upstream | 938108 | 34357275 ~ 34359451 (-) |
| G249978 | NA | other | upstream | 1470339 | 34889506 ~ 34889954 (-) |
| G249990 | NA | other | upstream | 1476791 | 34895958 ~ 34896296 (-) |
| G251462 | LOC106584332 | other | upstream | 2720945 | 36140112 ~ 36144572 (-) |
