G248256



Basic Information


Item Value
gene id G248256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33442724 ~ 33442934 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU283219
ggcagcagactttgtgaaaattaatatttgcgtcattctcaaaacttttggccacgactgtacttccAATGCCTCAACATGGACAGTCATTACAGTAAACAGAAAAGTTGGGAGGGAAATGTTTGATAGACACAATTTATGTTCATGTCTGCCCTCTCTCTTGCCTTGCACCATTCATATTGCCAGAAATTCTACCTCTCAACCACAGGAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU283219 True 211 lncRNA 0.41 1 33442724 33442934

Neighbor


gene id symbol gene type direction distance location
ube3d ube3d coding downstream 40852 33382980 ~ 33401872 (-)
LOC110518895 LOC106583864 coding downstream 105483 33301115 ~ 33337241 (-)
LOC118964365 NA coding downstream 156460 33286212 ~ 33286264 (-)
LOC110518882 LOC106583857 coding downstream 157945 33277982 ~ 33284779 (-)
LOC110518858 LOC106583820 coding downstream 385291 33041673 ~ 33057433 (-)
prss35 LOC106583947 coding upstream 64660 33507594 ~ 33513383 (-)
prdm13 LOC106583971 coding upstream 367711 33810645 ~ 33818250 (-)
zgc:172323 LOC106583978 coding upstream 385289 33828223 ~ 33835034 (-)
tstd3 hs6b coding upstream 396028 33838962 ~ 33844810 (-)
LOC110519190 NA coding upstream 602669 34045603 ~ 34046368 (-)
G248243 LOC106583887 non-coding downstream 17668 33424732 ~ 33425056 (-)
G248242 NA non-coding downstream 18581 33423794 ~ 33424143 (-)
G248240 NA non-coding downstream 22475 33419994 ~ 33420249 (-)
G248238 LOC106583887 non-coding downstream 23557 33418680 ~ 33419167 (-)
G248237 LOC106583887 non-coding downstream 25806 33416706 ~ 33416918 (-)
G248265 NA non-coding upstream 6304 33449238 ~ 33449493 (-)
G248408 NA non-coding upstream 38187 33481121 ~ 33481432 (-)
G248435 NA non-coding upstream 85657 33528591 ~ 33528935 (-)
G248441 LOC106583951 non-coding upstream 90016 33532950 ~ 33574056 (-)
G248501 NA non-coding upstream 173341 33616275 ~ 33655692 (-)
G248239 LOC106605043 other downstream 23017 33419429 ~ 33419707 (-)
LOC110518371 LOC106583543 other downstream 1861522 31562384 ~ 31631107 (-)
G245366 LOC106605077 other downstream 2496881 30944953 ~ 30945843 (-)
G244393 LOC106583245 other downstream 3225135 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 3242954 30199232 ~ 30199770 (-)
G249485 LOC106584080 other upstream 914341 34357275 ~ 34359451 (-)
G249978 NA other upstream 1446572 34889506 ~ 34889954 (-)
G249990 NA other upstream 1453024 34895958 ~ 34896296 (-)
G251462 LOC106584332 other upstream 2697178 36140112 ~ 36144572 (-)
G251681 NA other upstream 2914549 36357325 ~ 36357971 (-)

Expression



Co-expression Network