G248552


Basic Information

Item Value
gene id G248552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33675028 ~ 33675236 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU283555
caaacccacagtttcatcagctgtctgggtggctggtttcagacgatcccacaggtgaaaaagccagatgtggaggtcctgggctggcgtggttacatgcagtctgcggttgtgaggccgtttggatgtactgccaaagtCTCTAAAATTATATTGAGGTaatgcaacctggtctcagactCGGCATAAGTCTCGGTACATTTAAATCC

Function

NR:

description
NEDD8-conjugating enzyme UBE2F-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283555 True 209 lncRNA 0.49 1 33675028 33675236

Neighbor

gene id symbol gene type direction distance location
me1 LOC106583951 coding upstream 21962 33532885 ~ 33653066 (+)
snap91a LOC106583925 coding upstream 167723 33450441 ~ 33559250 (+)
LOC110518918 LOC106583887 coding upstream 232631 33401850 ~ 33442397 (+)
tpbgb LOC106583879 coding upstream 330506 33341367 ~ 33344522 (+)
LOC110518871 LOC100194712 coding upstream 502313 33086509 ~ 33172715 (+)
usp45 LOC106583983 coding downstream 171010 33846246 ~ 33894315 (+)
pnisr pnisr coding downstream 223638 33898874 ~ 33907094 (+)
coq3 LOC106605038 coding downstream 234545 33909781 ~ 33926457 (+)
LOC110519140 LOC106584034 coding downstream 251638 33926874 ~ 33954721 (+)
fbxl4 LOC106605030 coding downstream 344597 34019833 ~ 34041157 (+)
G248130 NA non-coding upstream 257387 33417329 ~ 33417641 (+)
G248120 ube3d non-coding upstream 279822 33394474 ~ 33395206 (+)
G248113 NA non-coding upstream 292330 33382466 ~ 33382698 (+)
G248112 NA non-coding upstream 292882 33381853 ~ 33382146 (+)
LOC110504028 LOC106604995 non-coding downstream 18414 33665557 ~ 33702310 (+)
G248619 NA non-coding downstream 57030 33732266 ~ 33732501 (+)
G248624 NA non-coding downstream 60195 33735431 ~ 33735763 (+)
G248627 NA non-coding downstream 63500 33738736 ~ 33738957 (+)
G248641 NA non-coding downstream 74721 33749957 ~ 33750187 (+)
G248134 NA other upstream 250925 33423789 ~ 33424103 (+)
LOC110518733 LOC106583759 other upstream 899241 32771075 ~ 32777409 (+)
G246282 NA other upstream 1815709 31852668 ~ 31859319 (+)
G245930 NA other upstream 1994388 31669958 ~ 31680640 (+)
G245799 NA other upstream 2049985 31492207 ~ 31641357 (+)
G248750 LOC106583978 other downstream 152984 33828220 ~ 33835275 (+)
G248794 NA other downstream 299240 33974476 ~ 33977835 (+)
G248795 NA other downstream 330922 34006158 ~ 34013057 (+)
G249245 NA other downstream 627336 34302572 ~ 34302907 (+)
G249323 NA other downstream 744654 34419890 ~ 34420612 (+)

Expression


Co-expression Network