G248624


Basic Information

Item Value
gene id G248624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33735431 ~ 33735763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU283628
gcactgcacccccagcagcaactcgcccaagccttccccatttctccttctcccaaatccattcagctgatgttctgaaagagctgcaaaatctggacccctacaaatcagccgggctagacaatctggaccctttctttctaaaattatctgccgaaattgttgccacccctattactagcctgttaaacctctctttcgtgtcgtctgagattcccaaagattggaaagcagctgcggtcatccccctcttcaaagggggggacactcttgacccaaactgctacagacctatatctatcctaccatgcctttctaaggtcttcgaaagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283628 True 333 lncRNA 0.49 1 33735431 33735763

Neighbor

gene id symbol gene type direction distance location
LOC110504028 LOC106604995 coding upstream 33121 33665557 ~ 33702310 (+)
me1 LOC106583951 coding upstream 82365 33532885 ~ 33653066 (+)
snap91a LOC106583925 coding upstream 228126 33450441 ~ 33559250 (+)
LOC110518918 LOC106583887 coding upstream 293034 33401850 ~ 33442397 (+)
tpbgb LOC106583879 coding upstream 390909 33341367 ~ 33344522 (+)
usp45 LOC106583983 coding downstream 110483 33846246 ~ 33894315 (+)
pnisr pnisr coding downstream 163111 33898874 ~ 33907094 (+)
coq3 LOC106605038 coding downstream 174018 33909781 ~ 33926457 (+)
LOC110519140 LOC106584034 coding downstream 191111 33926874 ~ 33954721 (+)
fbxl4 LOC106605030 coding downstream 284070 34019833 ~ 34041157 (+)
G248619 NA non-coding upstream 2930 33732266 ~ 33732501 (+)
G248552 NA non-coding upstream 60195 33675028 ~ 33675236 (+)
G248130 NA non-coding upstream 317790 33417329 ~ 33417641 (+)
G248627 NA non-coding downstream 2973 33738736 ~ 33738957 (+)
G248641 NA non-coding downstream 14194 33749957 ~ 33750187 (+)
G248658 NA non-coding downstream 24844 33760607 ~ 33760856 (+)
G248674 NA non-coding downstream 34597 33770360 ~ 33770647 (+)
G248677 NA non-coding downstream 36617 33772380 ~ 33772771 (+)
G248134 NA other upstream 311328 33423789 ~ 33424103 (+)
LOC110518733 LOC106583759 other upstream 959644 32771075 ~ 32777409 (+)
G246282 NA other upstream 1876112 31852668 ~ 31859319 (+)
G245930 NA other upstream 2054791 31669958 ~ 31680640 (+)
G245799 NA other upstream 2110388 31492207 ~ 31641357 (+)
G248750 LOC106583978 other downstream 92457 33828220 ~ 33835275 (+)
G248794 NA other downstream 238713 33974476 ~ 33977835 (+)
G248795 NA other downstream 270395 34006158 ~ 34013057 (+)
G249245 NA other downstream 566809 34302572 ~ 34302907 (+)
G249323 NA other downstream 684127 34419890 ~ 34420612 (+)

Expression


Co-expression Network