G248781


Basic Information

Item Value
gene id G248781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33897013 ~ 33897244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU283816
tggcatgtgtgtgtgctttggggacctttaatagaatgtgactggtagaaagggtgttgtatgtggaggatgagggctgtactaggtatctcagatagggggagtgaggtctaagaaggttttataaataagcatcaaccagtggttcttgcgatgggtatacagagatgaccagtttacagaggagtatagagtgcagtgatgtgtcctataaggagcattggtggaacAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283816 True 232 lncRNA 0.44 1 33897013 33897244

Neighbor

gene id symbol gene type direction distance location
usp45 LOC106583983 coding upstream 2698 33846246 ~ 33894315 (+)
LOC110504028 LOC106604995 coding upstream 194703 33665557 ~ 33702310 (+)
me1 LOC106583951 coding upstream 243947 33532885 ~ 33653066 (+)
snap91a LOC106583925 coding upstream 389708 33450441 ~ 33559250 (+)
LOC110518918 LOC106583887 coding upstream 454616 33401850 ~ 33442397 (+)
pnisr pnisr coding downstream 1630 33898874 ~ 33907094 (+)
coq3 LOC106605038 coding downstream 12537 33909781 ~ 33926457 (+)
LOC110519140 LOC106584034 coding downstream 29630 33926874 ~ 33954721 (+)
fbxl4 LOC106605030 coding downstream 122589 34019833 ~ 34041157 (+)
mms22l mms22l coding downstream 360109 34257353 ~ 34288713 (+)
G248779 NA non-coding upstream 564 33896185 ~ 33896449 (+)
G248754 NA non-coding upstream 56915 33838982 ~ 33840098 (+)
G248750 LOC106583978 non-coding upstream 61738 33828220 ~ 33835275 (+)
G248733 LOC106583971 non-coding upstream 78765 33816004 ~ 33818248 (+)
G248683 NA non-coding upstream 117442 33777845 ~ 33779571 (+)
G248810 NA non-coding downstream 58314 33955558 ~ 33957622 (+)
G248824 NA non-coding downstream 84073 33981317 ~ 33988384 (+)
G248825 NA non-coding downstream 89447 33986691 ~ 34072760 (+)
G248828 NA non-coding downstream 104604 34001848 ~ 34004925 (+)
G248134 NA other upstream 472910 33423789 ~ 33424103 (+)
LOC110518733 LOC106583759 other upstream 1121226 32771075 ~ 32777409 (+)
G246282 NA other upstream 2037694 31852668 ~ 31859319 (+)
G245930 NA other upstream 2216373 31669958 ~ 31680640 (+)
G248794 NA other downstream 77232 33974476 ~ 33977835 (+)
G248795 NA other downstream 108914 34006158 ~ 34013057 (+)
G249245 NA other downstream 405328 34302572 ~ 34302907 (+)
G249323 NA other downstream 522646 34419890 ~ 34420612 (+)
rab42b rab42 other downstream 1256458 35153546 ~ 35173463 (+)

Expression


Co-expression Network