G248841


Basic Information

Item Value
gene id G248841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34034883 ~ 34035271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU283894
atcacagacaaactgaattggtccactcacacagacagcattgtgaagaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaattcggcttgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctggcgggctgtatcaccgcctggtacggcaactgctccgccctcaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggaaggccataaagatcatcaaggacatcaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU283894 True 363 lncRNA 0.55 2 34034883 34035271

Neighbor

gene id symbol gene type direction distance location
LOC110519140 LOC106584034 coding upstream 82890 33926874 ~ 33954721 (+)
coq3 LOC106605038 coding upstream 108426 33909781 ~ 33926457 (+)
pnisr pnisr coding upstream 127789 33898874 ~ 33907094 (+)
usp45 LOC106583983 coding upstream 140568 33846246 ~ 33894315 (+)
LOC110504028 LOC106604995 coding upstream 332573 33665557 ~ 33702310 (+)
mms22l mms22l coding downstream 222082 34257353 ~ 34288713 (+)
LOC110519256 LOC106584073 coding downstream 311858 34347129 ~ 34351764 (+)
LOC110519270 LOC106584080 coding downstream 320813 34356084 ~ 34359512 (+)
cnih4 cnih4 coding downstream 366434 34401705 ~ 34413494 (+)
LOC110519336 LOC106584151 coding downstream 423232 34458503 ~ 34471595 (+)
G248828 NA non-coding upstream 29958 34001848 ~ 34004925 (+)
G248824 NA non-coding upstream 46499 33981317 ~ 33988384 (+)
G248810 NA non-coding upstream 77261 33955558 ~ 33957622 (+)
G248781 NA non-coding upstream 137639 33897013 ~ 33897244 (+)
G248849 NA non-coding downstream 13168 34048439 ~ 34071862 (+)
G249237 NA non-coding downstream 254086 34289357 ~ 34289560 (+)
G249239 NA non-coding downstream 256263 34291534 ~ 34292747 (+)
G249242 LOC106584066 non-coding downstream 261932 34297203 ~ 34297439 (+)
G249246 NA non-coding downstream 268319 34303590 ~ 34304009 (+)
G248795 NA other upstream 21826 34006158 ~ 34013057 (+)
G248794 NA other upstream 57048 33974476 ~ 33977835 (+)
G248750 LOC106583978 other upstream 199608 33828220 ~ 33835275 (+)
G248134 NA other upstream 610780 33423789 ~ 33424103 (+)
LOC110518733 LOC106583759 other upstream 1259096 32771075 ~ 32777409 (+)
G249245 NA other downstream 267301 34302572 ~ 34302907 (+)
G249323 NA other downstream 384619 34419890 ~ 34420612 (+)
rab42b rab42 other downstream 1118431 35153546 ~ 35173463 (+)
LOC110519579 gmeb1 other downstream 1184561 35203647 ~ 35221874 (+)
G251773 NA other downstream 2476303 36511574 ~ 36579307 (+)

Expression


Co-expression Network