G249450



Basic Information


Item Value
gene id G249450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34302155 ~ 34302584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU284564
cggggcggtaatcatttaggcaggttaccttcgcttccttgggcacagggactatggtggtctgcttgaaacatgtagatattacagactcggtcagggagaggttgaaaatgtcagtgaagacacttgacagttgttccgcgcatgctttgacgacacgtcctggtaatccgtctggcccagagGCTTTTGTACATGACAAGTGGTTGTCCCAATCCCCTATAGAGTAGAGACTGCGTTAGCTATGGAAACACAATTTACCTAGAACAACACTAGTGCTTACACCCAAAAAATACCAGTCCTAATCAAAAAAAAGGGGCAGGAGTATCCTCTGCTCTGAAGTTGTAGTGGTGATGactgtagcctggtcccatcATGTCAACTCCTTCGCATGACAAGGTGTGGCATGAAGGCGCAAACAAattggtac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU284564 True 430 lncRNA 0.47 1 34302155 34302584

Neighbor


gene id symbol gene type direction distance location
LOC110504035 LOC106581764 coding downstream 53551 34088843 ~ 34248604 (-)
pou3f2b LOC106584047 coding downstream 220460 34078198 ~ 34081695 (-)
LOC110519190 NA coding downstream 255787 34045603 ~ 34046368 (-)
tstd3 hs6b coding downstream 457345 33838962 ~ 33844810 (-)
zgc:172323 LOC106583978 coding downstream 467121 33828223 ~ 33835034 (-)
LOC110519284 LOC106605036 coding upstream 60419 34363003 ~ 34384107 (-)
LOC110519296 LOC106584119 coding upstream 111065 34413649 ~ 34426171 (-)
adcy3a LOC106584132 coding upstream 125999 34428583 ~ 34456802 (-)
LOC110519356 lyplal1 coding upstream 197561 34500145 ~ 34506986 (-)
tgfb2 LOC106584161 coding upstream 274486 34577070 ~ 34613851 (-)
G249449 NA non-coding downstream 4318 34297607 ~ 34297837 (-)
G249236 NA non-coding downstream 12925 34289006 ~ 34289230 (-)
G249188 NA non-coding downstream 48261 34253671 ~ 34253894 (-)
G249067 NA non-coding downstream 261008 34039205 ~ 34041147 (-)
G249026 NA non-coding downstream 347075 33950569 ~ 33955080 (-)
G249451 NA non-coding upstream 527 34303111 ~ 34303478 (-)
G249513 NA non-coding upstream 85932 34388516 ~ 34388730 (-)
G249514 NA non-coding upstream 86282 34388866 ~ 34389082 (-)
G249522 NA non-coding upstream 98205 34400789 ~ 34401072 (-)
G249501 NA non-coding upstream 109390 34411974 ~ 34413480 (-)
G248239 LOC106605043 other downstream 882448 33419429 ~ 33419707 (-)
LOC110518371 LOC106583543 other downstream 2720953 31562384 ~ 31631107 (-)
G245366 LOC106605077 other downstream 3356312 30944953 ~ 30945843 (-)
G244393 LOC106583245 other downstream 4084566 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 4102385 30199232 ~ 30199770 (-)
G249485 LOC106584080 other upstream 54691 34357275 ~ 34359451 (-)
G249978 NA other upstream 586922 34889506 ~ 34889954 (-)
G249990 NA other upstream 593374 34895958 ~ 34896296 (-)
G251462 LOC106584332 other upstream 1837528 36140112 ~ 36144572 (-)
G251681 NA other upstream 2054899 36357325 ~ 36357971 (-)

Expression



Co-expression Network