G249501


Basic Information

Item Value
gene id G249501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34411974 ~ 34413480 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU284634
TTTATTTATTTAAGAAACCCCACAAATTATTTTCAAAAGCAAAAATGAAACTTGACAGTCATTTTAGTTTGAGTTAAACAATCGGAAACACGCGCCCTCCCCCATGGAGTACATTTGGCTGGAAACTGTACAAATAAAGTGTTCACATTGACATACATAGTGATGTGCAATAAATGTGCTTCTGTCATACATAGTGACATGTAATACAACTATCATACAGACGAGGGCTTTGATTCAATCTGAAGCGCGATACAAATgtaaaaggcaatgttcccgcattTGTGATAAATGCTGCATGTCAGCTCAATTGGAAATGGCCTTAAATGAAATTGCGCTTCAGCGCTATGGATTGAATCGAGCCCAAGGTTATATTGCCCATTGATACACAGTCAGAGTGATAAAACCATTTTCCAATCCAGCTGCATGTATTCCCCTGAGAACACTTTTTGTTTTATAATACCAATCAAATGTGCACCTTTCAGCAGTCAGGGGATGTCAGATCTATAACTTATTGATGTTAAGAGAAACTGCAAGAAAATATAATAGAAATAGATCGCCAAAACGCAGGTTAGTATTCTGCAAAGGATATTCAATTCAAGGATTTTCCAGCATGTTGAcaagagaaacaaacaaaaaaaattgacAATCAAATATGGCATTCGCCATGCTGCAAGAGGATGTTCTAGCTGTTGTGATTGGCTCTTGGCTGTAAATGCTAAATCGTAGGCACCTGTACGATTGTCATGTTTTCCATCTGCCCAGAGAAGCAGTGCATGGACAGCATTGTTGGATACAGGCTGAAcgaaagaacacacacatacccacgtGCACAAGCGAGCGCGCACACTATTCCAGGGCAGTTATGAGAacacagaagggggggggggggggggtaaggtcATGTGACTCCAGCTGAGCAGAGGACTGAGGACCAGGACATATTGAACACCACATACTGATTAGTTTGTGATTTGGCCAATTGGATTAAAACAGCCATGGGGATCTCAATCGTTGATCAGTGCCAGGATCATGCTGTACAGGTAGATGAAGAAGCAGAGCAGGTGGAAGCCGAGTTTGATCATGGACTCTTTCATGTGAGACTTTAGTTGTCCCCGGTTGTGGATCTCAGTGGGGTCAAACACCCCCATGTTTCCCATGGGCACCTTCCAAACCCTGTCGGATAAACAATAGGTAGAGGAAAACTAACAACACTTGAGACAAAAGAACAACTGCTTGGGGTTGGCATATATCTCTAAGAGTTGGGGAGTTTGAAAAGGGCTTACATGGGCTAGGGTAGTTATAGTATTACTTGTGG

Function

NR:

description
PREDICTED: cornichon homolog 4 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284634 True 1315 lncRNA 0.42 2 34411974 34413480

Neighbor

gene id symbol gene type direction distance location
LOC110519284 LOC106605036 coding downstream 27867 34363003 ~ 34384107 (-)
klhl32 LOC106605029 coding downstream 83151 34291510 ~ 34328823 (-)
LOC110504035 LOC106581764 coding downstream 163370 34088843 ~ 34248604 (-)
pou3f2b LOC106584047 coding downstream 330279 34078198 ~ 34081695 (-)
LOC110519190 NA coding downstream 365606 34045603 ~ 34046368 (-)
LOC110519296 LOC106584119 coding upstream 169 34413649 ~ 34426171 (-)
adcy3a LOC106584132 coding upstream 15103 34428583 ~ 34456802 (-)
LOC110519356 lyplal1 coding upstream 86665 34500145 ~ 34506986 (-)
tgfb2 LOC106584161 coding upstream 163590 34577070 ~ 34613851 (-)
LOC110519379 NA coding upstream 183420 34596900 ~ 34601665 (-)
G249522 NA non-coding downstream 10902 34400789 ~ 34401072 (-)
G249514 NA non-coding downstream 22892 34388866 ~ 34389082 (-)
G249513 NA non-coding downstream 23244 34388516 ~ 34388730 (-)
G249497 NA non-coding upstream 13466 34426946 ~ 34427645 (-)
G249499 NA non-coding upstream 14405 34427885 ~ 34428366 (-)
G249537 NA non-coding upstream 30739 34444219 ~ 34444546 (-)
G249485 LOC106584080 other downstream 52523 34357275 ~ 34359451 (-)
G248239 LOC106605043 other downstream 992267 33419429 ~ 33419707 (-)
LOC110518371 LOC106583543 other downstream 2830772 31562384 ~ 31631107 (-)
G245366 LOC106605077 other downstream 3466131 30944953 ~ 30945843 (-)
G244393 LOC106583245 other downstream 4194385 30211570 ~ 30217682 (-)
G249978 NA other upstream 476026 34889506 ~ 34889954 (-)
G249990 NA other upstream 482478 34895958 ~ 34896296 (-)
G251462 LOC106584332 other upstream 1726632 36140112 ~ 36144572 (-)
G251681 NA other upstream 1944003 36357325 ~ 36357971 (-)
gpatch3 gpatch3 other upstream 2318365 36731832 ~ 36754332 (-)

Expression


Co-expression Network