Gene
RNA
| Item | Value |
|---|---|
| gene id | G249499 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 34427885 ~ 34428366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU284632 | True | 482 | lncRNA | 0.41 | 1 | 34427885 | 34428366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519296 | LOC106584119 | coding | downstream | 1714 | 34413649 ~ 34426171 (-) |
| LOC110519284 | LOC106605036 | coding | downstream | 43778 | 34363003 ~ 34384107 (-) |
| klhl32 | LOC106605029 | coding | downstream | 99062 | 34291510 ~ 34328823 (-) |
| LOC110504035 | LOC106581764 | coding | downstream | 179281 | 34088843 ~ 34248604 (-) |
| pou3f2b | LOC106584047 | coding | downstream | 346190 | 34078198 ~ 34081695 (-) |
| adcy3a | LOC106584132 | coding | upstream | 217 | 34428583 ~ 34456802 (-) |
| LOC110519356 | lyplal1 | coding | upstream | 71779 | 34500145 ~ 34506986 (-) |
| tgfb2 | LOC106584161 | coding | upstream | 148704 | 34577070 ~ 34613851 (-) |
| LOC110519379 | NA | coding | upstream | 168534 | 34596900 ~ 34601665 (-) |
| LOC110519387 | LOC106584165 | coding | upstream | 188366 | 34616732 ~ 34629879 (-) |
| G249497 | NA | non-coding | downstream | 240 | 34426946 ~ 34427645 (-) |
| G249501 | NA | non-coding | downstream | 14405 | 34411974 ~ 34413480 (-) |
| G249522 | NA | non-coding | downstream | 26813 | 34400789 ~ 34401072 (-) |
| G249514 | NA | non-coding | downstream | 38803 | 34388866 ~ 34389082 (-) |
| G249537 | NA | non-coding | upstream | 15853 | 34444219 ~ 34444546 (-) |
| G249502 | NA | non-coding | upstream | 41805 | 34470171 ~ 34471282 (-) |
| G249545 | NA | non-coding | upstream | 44228 | 34472594 ~ 34472798 (-) |
| G249546 | NA | non-coding | upstream | 44880 | 34473246 ~ 34473547 (-) |
| G249485 | LOC106584080 | other | downstream | 68434 | 34357275 ~ 34359451 (-) |
| G248239 | LOC106605043 | other | downstream | 1008178 | 33419429 ~ 33419707 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 2846683 | 31562384 ~ 31631107 (-) |
| G245366 | LOC106605077 | other | downstream | 3482042 | 30944953 ~ 30945843 (-) |
| G244393 | LOC106583245 | other | downstream | 4210296 | 30211570 ~ 30217682 (-) |
| G249978 | NA | other | upstream | 461140 | 34889506 ~ 34889954 (-) |
| G249990 | NA | other | upstream | 467592 | 34895958 ~ 34896296 (-) |
| G251462 | LOC106584332 | other | upstream | 1711746 | 36140112 ~ 36144572 (-) |
| G251681 | NA | other | upstream | 1929117 | 36357325 ~ 36357971 (-) |
| gpatch3 | gpatch3 | other | upstream | 2303479 | 36731832 ~ 36754332 (-) |
