G249340


Basic Information

Item Value
gene id G249340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34443219 ~ 34443516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU284450
AGTCTGGCCACTGTGTCGTACCTGACGTTTTCGTGGCGATACATGTACATGGTGTTGAACTGCTGCATCTCCTTCTGTCCAGTCTGACTGGCTTCTTTCTTCTTCATGTCCTGCAACATCTCGTCTGCTATATGCTTGGGCAGGATGGACAGCAAGAGACGCTCCTGTGGAGGACAGGGAGAGTGGTGGTGTTTCAGTGGATATGAGGAGACTCCAAAGAGCCTCAATAGACGCACGCACGGCTTACAATAAAGGCACTTACATGTTGTGTGATTGGCAGCAGAATCAATCAATGCTC

Function

NR:

description
PREDICTED: adenylate cyclase type 3-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284450 True 298 lncRNA 0.50 1 34443219 34443516

Neighbor

gene id symbol gene type direction distance location
cnih4 cnih4 coding upstream 29725 34401705 ~ 34413494 (+)
LOC110519270 LOC106584080 coding upstream 83707 34356084 ~ 34359512 (+)
LOC110519256 LOC106584073 coding upstream 91455 34347129 ~ 34351764 (+)
mms22l mms22l coding upstream 154506 34257353 ~ 34288713 (+)
fbxl4 LOC106605030 coding upstream 402062 34019833 ~ 34041157 (+)
LOC110519336 LOC106584151 coding downstream 14987 34458503 ~ 34471595 (+)
LOC118964383 NA coding downstream 140835 34584351 ~ 34584491 (+)
LOC118944510 NA coding downstream 222080 34665596 ~ 34666854 (+)
LOC110504041 LOC106605016 coding downstream 228370 34671886 ~ 34707455 (+)
LOC110519409 scmh1 coding downstream 547507 34991023 ~ 35038369 (+)
G249339 NA non-coding upstream 105 34442910 ~ 34443114 (+)
G249338 NA non-coding upstream 468 34442544 ~ 34442751 (+)
G249337 NA non-coding upstream 2730 34440227 ~ 34440489 (+)
G249335 NA non-coding upstream 4276 34438478 ~ 34438943 (+)
G249333 LOC106584132 non-coding upstream 7087 34435873 ~ 34436132 (+)
G249343 NA non-coding downstream 2378 34445894 ~ 34446140 (+)
G249347 NA non-coding downstream 6751 34450267 ~ 34450644 (+)
G249349 NA non-coding downstream 8122 34451638 ~ 34451869 (+)
G249350 NA non-coding downstream 8391 34451907 ~ 34452122 (+)
G249351 NA non-coding downstream 9214 34452730 ~ 34452945 (+)
G249323 NA other upstream 22607 34419890 ~ 34420612 (+)
G249245 NA other upstream 140312 34302572 ~ 34302907 (+)
G248795 NA other upstream 430162 34006158 ~ 34013057 (+)
G248794 NA other upstream 465384 33974476 ~ 33977835 (+)
G248750 LOC106583978 other upstream 607944 33828220 ~ 33835275 (+)
rab42b rab42 other downstream 710186 35153546 ~ 35173463 (+)
LOC110519579 gmeb1 other downstream 776316 35203647 ~ 35221874 (+)
G251773 NA other downstream 2068058 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 2180094 36623610 ~ 36627542 (+)
G253299 NA other downstream 3283432 37726948 ~ 37727338 (+)

Expression


Co-expression Network