G249349


Basic Information

Item Value
gene id G249349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34451638 ~ 34451869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU284459
cacacacacacacacatgctcacacacatttAACTAGCTTAGTGTAGTGTAACAGTAGATCAAATTGAACTGTAGATACTAAGAATTGTGTTTAAATTCAATTTGGCTTCAAACATAGACAACTGGTCTGAATCAGAACCACATACATTCAAACCAGGGCACTACTCTGGCACTGCCACACACTCCTTATTGCCCCCCCCATTCTCTAACCTACCACTCAAACCTACTAACc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284459 True 232 lncRNA 0.41 1 34451638 34451869

Neighbor

gene id symbol gene type direction distance location
cnih4 cnih4 coding upstream 38144 34401705 ~ 34413494 (+)
LOC110519270 LOC106584080 coding upstream 92126 34356084 ~ 34359512 (+)
LOC110519256 LOC106584073 coding upstream 99874 34347129 ~ 34351764 (+)
mms22l mms22l coding upstream 162925 34257353 ~ 34288713 (+)
fbxl4 LOC106605030 coding upstream 410481 34019833 ~ 34041157 (+)
LOC110519336 LOC106584151 coding downstream 6634 34458503 ~ 34471595 (+)
LOC118964383 NA coding downstream 132482 34584351 ~ 34584491 (+)
LOC118944510 NA coding downstream 213727 34665596 ~ 34666854 (+)
LOC110504041 LOC106605016 coding downstream 220017 34671886 ~ 34707455 (+)
LOC110519409 scmh1 coding downstream 539154 34991023 ~ 35038369 (+)
G249347 NA non-coding upstream 994 34450267 ~ 34450644 (+)
G249343 NA non-coding upstream 5498 34445894 ~ 34446140 (+)
G249340 NA non-coding upstream 8122 34443219 ~ 34443516 (+)
G249339 NA non-coding upstream 8524 34442910 ~ 34443114 (+)
G249338 NA non-coding upstream 8887 34442544 ~ 34442751 (+)
G249350 NA non-coding downstream 38 34451907 ~ 34452122 (+)
G249351 NA non-coding downstream 861 34452730 ~ 34452945 (+)
G249354 NA non-coding downstream 4846 34456715 ~ 34456934 (+)
G249364 NA non-coding downstream 40487 34492356 ~ 34493274 (+)
G249365 NA non-coding downstream 41424 34493293 ~ 34493539 (+)
G249323 NA other upstream 31026 34419890 ~ 34420612 (+)
G249245 NA other upstream 148731 34302572 ~ 34302907 (+)
G248795 NA other upstream 438581 34006158 ~ 34013057 (+)
G248794 NA other upstream 473803 33974476 ~ 33977835 (+)
G248750 LOC106583978 other upstream 616363 33828220 ~ 33835275 (+)
rab42b rab42 other downstream 701833 35153546 ~ 35173463 (+)
LOC110519579 gmeb1 other downstream 767963 35203647 ~ 35221874 (+)
G251773 NA other downstream 2059705 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 2171741 36623610 ~ 36627542 (+)
G253299 NA other downstream 3275079 37726948 ~ 37727338 (+)

Expression


Co-expression Network