G249354


Basic Information

Item Value
gene id G249354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34456715 ~ 34456934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU284464
ACCTGTATCGATTATTCCACTGAAACCCTGTATTGAACGTGTGATCAATACCCAGACCATTGACCTTTTTTACTGGAAAAAAACTAATCAACAACATCTCCCTGCCTCTCAGGCCCAAATTGAACAATCATACCTGTATTCATCCCTCTATAGCTTGGGGTGTGTGATACCCAATATCACAGGGCCCACTGTCCTCTCCCTTGTTACTATGCCCCCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284464 True 220 lncRNA 0.45 1 34456715 34456934

Neighbor

gene id symbol gene type direction distance location
cnih4 cnih4 coding upstream 43221 34401705 ~ 34413494 (+)
LOC110519270 LOC106584080 coding upstream 97203 34356084 ~ 34359512 (+)
LOC110519256 LOC106584073 coding upstream 104951 34347129 ~ 34351764 (+)
mms22l mms22l coding upstream 168002 34257353 ~ 34288713 (+)
fbxl4 LOC106605030 coding upstream 415558 34019833 ~ 34041157 (+)
LOC110519336 LOC106584151 coding downstream 1569 34458503 ~ 34471595 (+)
LOC118964383 NA coding downstream 127417 34584351 ~ 34584491 (+)
LOC118944510 NA coding downstream 208662 34665596 ~ 34666854 (+)
LOC110504041 LOC106605016 coding downstream 214952 34671886 ~ 34707455 (+)
LOC110519409 scmh1 coding downstream 534089 34991023 ~ 35038369 (+)
G249351 NA non-coding upstream 3770 34452730 ~ 34452945 (+)
G249350 NA non-coding upstream 4593 34451907 ~ 34452122 (+)
G249349 NA non-coding upstream 4846 34451638 ~ 34451869 (+)
G249347 NA non-coding upstream 6071 34450267 ~ 34450644 (+)
G249343 NA non-coding upstream 10575 34445894 ~ 34446140 (+)
G249364 NA non-coding downstream 35422 34492356 ~ 34493274 (+)
G249365 NA non-coding downstream 36359 34493293 ~ 34493539 (+)
G249367 NA non-coding downstream 39005 34495939 ~ 34496238 (+)
G249368 NA non-coding downstream 39597 34496531 ~ 34496753 (+)
G249274 lyplal1 non-coding downstream 44720 34501654 ~ 34506269 (+)
G249323 NA other upstream 36103 34419890 ~ 34420612 (+)
G249245 NA other upstream 153808 34302572 ~ 34302907 (+)
G248795 NA other upstream 443658 34006158 ~ 34013057 (+)
G248794 NA other upstream 478880 33974476 ~ 33977835 (+)
G248750 LOC106583978 other upstream 621440 33828220 ~ 33835275 (+)
rab42b rab42 other downstream 696768 35153546 ~ 35173463 (+)
LOC110519579 gmeb1 other downstream 762898 35203647 ~ 35221874 (+)
G251773 NA other downstream 2054640 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 2166676 36623610 ~ 36627542 (+)
G253299 NA other downstream 3270014 37726948 ~ 37727338 (+)

Expression


Co-expression Network