G250009


Basic Information

Item Value
gene id G250009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34908810 ~ 34909295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU285161
gtgacgtagaagtccgtcactggccgcgggcagcatttggttctttaacgcacacacatattcatcactcctccctgcgcaattataccataagttaacaatgtgggtcgacacacaaattaacttctgtcttggtgcaggcatttcacacttgtcaatgttcatatttgagagatacaataagtattatacttatcaatgttgtggatgagcgcattgtttgtttgttctgttcctctctctccatctctgtagcttccgggtatgctggaaaaggacccgagctaagggaattgggttggctttatagtgcctgtcccaaatggctcattaatgcatatgggcatattgaaagatattgtcagtagtgatgtaatgttgtaaatgttatgttgtgatattgtttaaaaccgtgttgcaatgtatatcctttagtatgtttagttcatggaaaatgtaggtttgtattgttaattgattaattaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU285161 True 486 lncRNA 0.39 1 34908810 34909295

Neighbor

gene id symbol gene type direction distance location
LOC110504041 LOC106605016 coding upstream 232835 34671886 ~ 34707455 (+)
LOC118944510 NA coding upstream 241956 34665596 ~ 34666854 (+)
LOC118964383 NA coding upstream 324319 34584351 ~ 34584491 (+)
LOC110519336 LOC106584151 coding upstream 437215 34458503 ~ 34471595 (+)
cnih4 cnih4 coding upstream 495316 34401705 ~ 34413494 (+)
LOC110519409 scmh1 coding downstream 81728 34991023 ~ 35038369 (+)
ctps1b LOC106584221 coding downstream 210411 35119706 ~ 35153002 (+)
rab42b rab42 coding downstream 244251 35153546 ~ 35173463 (+)
LOC110519579 gmeb1 coding downstream 294352 35203647 ~ 35221874 (+)
ptprub ptpru coding downstream 348800 35258095 ~ 35611096 (+)
G249988 NA non-coding upstream 13346 34894997 ~ 34895464 (+)
G249953 NA non-coding upstream 27544 34880935 ~ 34881266 (+)
G249778 NA non-coding upstream 178215 34729824 ~ 34730595 (+)
G249758 NA non-coding upstream 193722 34714815 ~ 34715088 (+)
G249749 NA non-coding upstream 200878 34707696 ~ 34707932 (+)
G250016 NA non-coding downstream 5803 34915098 ~ 34915347 (+)
G250029 NA non-coding downstream 59563 34968858 ~ 34982923 (+)
G250150 NA non-coding downstream 136851 35046146 ~ 35046501 (+)
G250158 NA non-coding downstream 150231 35059526 ~ 35059740 (+)
G250159 NA non-coding downstream 150504 35059799 ~ 35060015 (+)
G249323 NA other upstream 488198 34419890 ~ 34420612 (+)
G249245 NA other upstream 605903 34302572 ~ 34302907 (+)
G248795 NA other upstream 895753 34006158 ~ 34013057 (+)
G248794 NA other upstream 930975 33974476 ~ 33977835 (+)
G248750 LOC106583978 other upstream 1073535 33828220 ~ 33835275 (+)
G251773 NA other downstream 1602279 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1714315 36623610 ~ 36627542 (+)
G253299 NA other downstream 2817653 37726948 ~ 37727338 (+)

Expression


Co-expression Network