Gene
RNA
| Item | Value |
|---|---|
| gene id | G250159 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 35059799 ~ 35060015 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU285337 | True | 217 | lncRNA | 0.41 | 1 | 35059799 | 35060015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519409 | scmh1 | coding | upstream | 21430 | 34991023 ~ 35038369 (+) |
| LOC110504041 | LOC106605016 | coding | upstream | 383824 | 34671886 ~ 34707455 (+) |
| LOC118944510 | NA | coding | upstream | 392945 | 34665596 ~ 34666854 (+) |
| LOC118964383 | NA | coding | upstream | 475308 | 34584351 ~ 34584491 (+) |
| LOC110519336 | LOC106584151 | coding | upstream | 588204 | 34458503 ~ 34471595 (+) |
| ctps1b | LOC106584221 | coding | downstream | 59691 | 35119706 ~ 35153002 (+) |
| rab42b | rab42 | coding | downstream | 93531 | 35153546 ~ 35173463 (+) |
| LOC110519579 | gmeb1 | coding | downstream | 143632 | 35203647 ~ 35221874 (+) |
| ptprub | ptpru | coding | downstream | 198080 | 35258095 ~ 35611096 (+) |
| serinc2l | LOC106584332 | coding | downstream | 1065312 | 36125327 ~ 36144587 (+) |
| G250158 | NA | non-coding | upstream | 59 | 35059526 ~ 35059740 (+) |
| G250150 | NA | non-coding | upstream | 13298 | 35046146 ~ 35046501 (+) |
| G250029 | NA | non-coding | upstream | 76876 | 34968858 ~ 34982923 (+) |
| G250016 | NA | non-coding | upstream | 144452 | 34915098 ~ 34915347 (+) |
| G250009 | NA | non-coding | upstream | 150504 | 34908810 ~ 34909295 (+) |
| G250160 | NA | non-coding | downstream | 240 | 35060255 ~ 35060482 (+) |
| G250398 | NA | non-coding | downstream | 201195 | 35261210 ~ 35261419 (+) |
| G250401 | NA | non-coding | downstream | 204393 | 35264408 ~ 35264638 (+) |
| G250404 | NA | non-coding | downstream | 206119 | 35266134 ~ 35266436 (+) |
| G250405 | LOC106584099 | non-coding | downstream | 207649 | 35267664 ~ 35267944 (+) |
| G249323 | NA | other | upstream | 639187 | 34419890 ~ 34420612 (+) |
| G249245 | NA | other | upstream | 756892 | 34302572 ~ 34302907 (+) |
| G248795 | NA | other | upstream | 1046742 | 34006158 ~ 34013057 (+) |
| G248794 | NA | other | upstream | 1081964 | 33974476 ~ 33977835 (+) |
| G248750 | LOC106583978 | other | upstream | 1224524 | 33828220 ~ 33835275 (+) |
| G251773 | NA | other | downstream | 1451559 | 36511574 ~ 36579307 (+) |
| G251845 | zdhhc18 | other | downstream | 1563595 | 36623610 ~ 36627542 (+) |
| G253299 | NA | other | downstream | 2666933 | 37726948 ~ 37727338 (+) |
