G250160



Basic Information


Item Value
gene id G250160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35060255 ~ 35060482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU285338
gtttgtaggcctccttgctcgcacacactttttcaggtctgcccacaaattttctataggattgaggtcagggctttggtgatggccactccaataccttgactttgttgtccttaacgtAGCAAAAATTACTAACTCATCTTTTGACCAAAttagcagttactgcctttttgcttggtagggcagtataggtttcacattttttaaatatgttgACTGATAAAAAAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU285338 True 228 lncRNA 0.39 1 35060255 35060482

Neighbor


gene id symbol gene type direction distance location
LOC110519409 scmh1 coding upstream 21886 34991023 ~ 35038369 (+)
LOC110504041 LOC106605016 coding upstream 384280 34671886 ~ 34707455 (+)
LOC118944510 NA coding upstream 393401 34665596 ~ 34666854 (+)
LOC118964383 NA coding upstream 475764 34584351 ~ 34584491 (+)
LOC110519336 LOC106584151 coding upstream 588660 34458503 ~ 34471595 (+)
ctps1b LOC106584221 coding downstream 59224 35119706 ~ 35153002 (+)
rab42b rab42 coding downstream 93064 35153546 ~ 35173463 (+)
LOC110519579 gmeb1 coding downstream 143165 35203647 ~ 35221874 (+)
ptprub ptpru coding downstream 197613 35258095 ~ 35611096 (+)
serinc2l LOC106584332 coding downstream 1064845 36125327 ~ 36144587 (+)
G250159 NA non-coding upstream 240 35059799 ~ 35060015 (+)
G250158 NA non-coding upstream 515 35059526 ~ 35059740 (+)
G250150 NA non-coding upstream 13754 35046146 ~ 35046501 (+)
G250029 NA non-coding upstream 77332 34968858 ~ 34982923 (+)
G250016 NA non-coding upstream 144908 34915098 ~ 34915347 (+)
G250398 NA non-coding downstream 200728 35261210 ~ 35261419 (+)
G250401 NA non-coding downstream 203926 35264408 ~ 35264638 (+)
G250404 NA non-coding downstream 205652 35266134 ~ 35266436 (+)
G250405 LOC106584099 non-coding downstream 207182 35267664 ~ 35267944 (+)
G250408 NA non-coding downstream 211411 35271893 ~ 35272185 (+)
G249323 NA other upstream 639643 34419890 ~ 34420612 (+)
G249245 NA other upstream 757348 34302572 ~ 34302907 (+)
G248795 NA other upstream 1047198 34006158 ~ 34013057 (+)
G248794 NA other upstream 1082420 33974476 ~ 33977835 (+)
G248750 LOC106583978 other upstream 1224980 33828220 ~ 33835275 (+)
G251773 NA other downstream 1451092 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1563128 36623610 ~ 36627542 (+)
G253299 NA other downstream 2666466 37726948 ~ 37727338 (+)

Expression



Co-expression Network