Gene
RNA
| Item | Value |
|---|---|
| gene id | G250365 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 35209317 ~ 35214513 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU285565 | True | 539 | lncRNA | 0.42 | 2 | 35209317 | 35214513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-34d22.1 | LOC106584244 | coding | downstream | 6374 | 35175483 ~ 35202943 (-) |
| taf12 | taf12 | coding | downstream | 34053 | 35169845 ~ 35175264 (-) |
| LOC118944512 | NA | coding | downstream | 118924 | 35089126 ~ 35090393 (-) |
| cited4b | LOC106584212 | coding | downstream | 157036 | 35049466 ~ 35052281 (-) |
| vegf | vegf | coding | downstream | 378089 | 34814879 ~ 34831228 (-) |
| LOC110519653 | LOC106584320 | coding | upstream | 888330 | 36102843 ~ 36109194 (-) |
| stmn1b | LOC106584327 | coding | upstream | 897674 | 36112187 ~ 36117544 (-) |
| LOC110519907 | oprd1 | coding | upstream | 1221868 | 36436381 ~ 36437754 (-) |
| LOC110504056 | NA | coding | upstream | 1272362 | 36486875 ~ 36505339 (-) |
| tent5ba | fam46b | coding | upstream | 1329657 | 36544170 ~ 36568553 (-) |
| G250247 | NA | non-coding | downstream | 148008 | 35061090 ~ 35061309 (-) |
| G250244 | NA | non-coding | downstream | 151068 | 35057919 ~ 35058249 (-) |
| G250149 | NA | non-coding | downstream | 164800 | 35044299 ~ 35044517 (-) |
| G250124 | NA | non-coding | downstream | 173753 | 35008313 ~ 35035564 (-) |
| G250072 | NA | non-coding | downstream | 208644 | 34922965 ~ 35000673 (-) |
| G250689 | NA | non-coding | upstream | 53920 | 35268433 ~ 35268694 (-) |
| G250691 | NA | non-coding | upstream | 58744 | 35273257 ~ 35273519 (-) |
| G250692 | NA | non-coding | upstream | 59203 | 35273716 ~ 35274033 (-) |
| G250706 | NA | non-coding | upstream | 81209 | 35295722 ~ 35295938 (-) |
| G250707 | NA | non-coding | upstream | 82711 | 35297224 ~ 35297513 (-) |
| G249990 | NA | other | downstream | 313021 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 319363 | 34889506 ~ 34889954 (-) |
| G249485 | LOC106584080 | other | downstream | 849866 | 34357275 ~ 34359451 (-) |
| G248239 | LOC106605043 | other | downstream | 1789610 | 33419429 ~ 33419707 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 3628115 | 31562384 ~ 31631107 (-) |
| G251462 | LOC106584332 | other | upstream | 925599 | 36140112 ~ 36144572 (-) |
| G251681 | NA | other | upstream | 1142970 | 36357325 ~ 36357971 (-) |
| gpatch3 | gpatch3 | other | upstream | 1517332 | 36731832 ~ 36754332 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 4184748 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 4430058 | 39644571 ~ 39645743 (-) |
