G250398


Basic Information

Item Value
gene id G250398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35261210 ~ 35261419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU285600
gttttaaggacattacatcaatgttggatcagcctgtagtgtggttttccactgtaattttgagtgtgactccaaatccagacctctatGGGCTGATAAATTTGATGTCCATTGATAATTGATaagtgattttgttgtcagcacattcagctatgtaaagaaaaaaagtatttaataagaatatttcattcgttcagatatttttttgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285600 True 210 lncRNA 0.32 1 35261210 35261419

Neighbor

gene id symbol gene type direction distance location
LOC110519579 gmeb1 coding upstream 39336 35203647 ~ 35221874 (+)
rab42b rab42 coding upstream 90946 35153546 ~ 35173463 (+)
ctps1b LOC106584221 coding upstream 108208 35119706 ~ 35153002 (+)
LOC110519409 scmh1 coding upstream 222841 34991023 ~ 35038369 (+)
LOC110504041 LOC106605016 coding upstream 585235 34671886 ~ 34707455 (+)
serinc2l LOC106584332 coding downstream 863908 36125327 ~ 36144587 (+)
LOC110519702 LOC106584341 coding downstream 910774 36172193 ~ 36262289 (+)
LOC110519762 LOC106584688 coding downstream 1032405 36293824 ~ 36301569 (+)
phactr4b LOC106584362 coding downstream 1055894 36317313 ~ 36368316 (+)
rcc1 rcc1 coding downstream 1120051 36381470 ~ 36387216 (+)
G250160 NA non-coding upstream 200728 35060255 ~ 35060482 (+)
G250159 NA non-coding upstream 201195 35059799 ~ 35060015 (+)
G250158 NA non-coding upstream 201470 35059526 ~ 35059740 (+)
G250150 NA non-coding upstream 214709 35046146 ~ 35046501 (+)
G250029 NA non-coding upstream 278287 34968858 ~ 34982923 (+)
G250401 NA non-coding downstream 2989 35264408 ~ 35264638 (+)
G250404 NA non-coding downstream 4715 35266134 ~ 35266436 (+)
G250405 LOC106584099 non-coding downstream 6245 35267664 ~ 35267944 (+)
G250408 NA non-coding downstream 10474 35271893 ~ 35272185 (+)
G250409 NA non-coding downstream 11776 35273195 ~ 35273689 (+)
G249323 NA other upstream 840598 34419890 ~ 34420612 (+)
G249245 NA other upstream 958303 34302572 ~ 34302907 (+)
G248795 NA other upstream 1248153 34006158 ~ 34013057 (+)
G251773 NA other downstream 1250155 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1362191 36623610 ~ 36627542 (+)
G253299 NA other downstream 2465529 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 2830903 38092322 ~ 38092734 (+)
G254204 NA other downstream 3179747 38441166 ~ 38441734 (+)

Expression


Co-expression Network