G250425



Basic Information


Item Value
gene id G250425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35292133 ~ 35292371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU285627
ctctcttagtctctcgTTTTCTCAAATTGTCATAATTCGTTTTTACCTAATTGGAGTATGGTAATACTTTGCTGTACTACACCCCGAGGTATTTTAGCAGTGCTCTAAAGTGTTTGGCACAGAGGCGCGTGCGTgagcacacacagacatgcgCACATAtgtacccacccacccacgcaccacaagtaacacacacacacacacatcttttgagatattttgggGGAATGTAATTAATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU285627 True 239 lncRNA 0.44 1 35292133 35292371

Neighbor


gene id symbol gene type direction distance location
LOC110519579 gmeb1 coding upstream 70259 35203647 ~ 35221874 (+)
rab42b rab42 coding upstream 121869 35153546 ~ 35173463 (+)
ctps1b LOC106584221 coding upstream 139131 35119706 ~ 35153002 (+)
LOC110519409 scmh1 coding upstream 253764 34991023 ~ 35038369 (+)
LOC110504041 LOC106605016 coding upstream 616158 34671886 ~ 34707455 (+)
serinc2l LOC106584332 coding downstream 832956 36125327 ~ 36144587 (+)
LOC110519702 LOC106584341 coding downstream 879822 36172193 ~ 36262289 (+)
LOC110519762 LOC106584688 coding downstream 1001453 36293824 ~ 36301569 (+)
phactr4b LOC106584362 coding downstream 1024942 36317313 ~ 36368316 (+)
rcc1 rcc1 coding downstream 1089099 36381470 ~ 36387216 (+)
G250410 NA non-coding upstream 18124 35273804 ~ 35274009 (+)
G250409 NA non-coding upstream 18444 35273195 ~ 35273689 (+)
G250408 NA non-coding upstream 19948 35271893 ~ 35272185 (+)
G250405 LOC106584099 non-coding upstream 24189 35267664 ~ 35267944 (+)
G250404 NA non-coding upstream 25697 35266134 ~ 35266436 (+)
G250428 NA non-coding downstream 3781 35296152 ~ 35296376 (+)
G250431 NA non-coding downstream 9437 35301808 ~ 35302010 (+)
G250436 NA non-coding downstream 18279 35310650 ~ 35311031 (+)
G250486 NA non-coding downstream 86641 35379012 ~ 35379251 (+)
G250490 NA non-coding downstream 89752 35382123 ~ 35382324 (+)
G249323 NA other upstream 871521 34419890 ~ 34420612 (+)
G249245 NA other upstream 989226 34302572 ~ 34302907 (+)
G248795 NA other upstream 1279076 34006158 ~ 34013057 (+)
G251773 NA other downstream 1219203 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1331239 36623610 ~ 36627542 (+)
G253299 NA other downstream 2434577 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 2799951 38092322 ~ 38092734 (+)
G254204 NA other downstream 3148795 38441166 ~ 38441734 (+)

Expression



Co-expression Network