G250493


Basic Information

Item Value
gene id G250493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35384120 ~ 35384499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU285698
gcctggtactcagcactctattgtcactctaatcactctgacatcaatgtaaaTGTATTCGAAAGTTTTATCAAACACTTAATGAGAGCcaatgagctcatgttgcgcaacatttttaTAGGCTAAGCAATTGCGGGAGAAAACAGACTGATGGCCGctaataaaaagaggaggatcccatcagctttctataggctagacctactatatttatttctcaactttcctaatattaagcacattgcttatatttacaacaggagtatagcctacctgtctggcatgaaaataaaccatggggaaaagcgtcctccattcgctatttaagtgcatagatgacatttTTTCCCACTGACCCTGTTTTGATACAGGtacatgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285698 True 380 lncRNA 0.39 1 35384120 35384499

Neighbor

gene id symbol gene type direction distance location
LOC110519579 gmeb1 coding upstream 162246 35203647 ~ 35221874 (+)
rab42b rab42 coding upstream 213856 35153546 ~ 35173463 (+)
ctps1b LOC106584221 coding upstream 231118 35119706 ~ 35153002 (+)
LOC110519409 scmh1 coding upstream 345751 34991023 ~ 35038369 (+)
LOC110504041 LOC106605016 coding upstream 708145 34671886 ~ 34707455 (+)
serinc2l LOC106584332 coding downstream 740828 36125327 ~ 36144587 (+)
LOC110519702 LOC106584341 coding downstream 787694 36172193 ~ 36262289 (+)
LOC110519762 LOC106584688 coding downstream 909325 36293824 ~ 36301569 (+)
phactr4b LOC106584362 coding downstream 932814 36317313 ~ 36368316 (+)
rcc1 rcc1 coding downstream 996971 36381470 ~ 36387216 (+)
G250492 NA non-coding upstream 585 35383327 ~ 35383535 (+)
G250491 NA non-coding upstream 1461 35382421 ~ 35382659 (+)
G250490 NA non-coding upstream 1796 35382123 ~ 35382324 (+)
G250486 NA non-coding upstream 4869 35379012 ~ 35379251 (+)
G250436 NA non-coding upstream 73089 35310650 ~ 35311031 (+)
G250495 NA non-coding downstream 1434 35385933 ~ 35386241 (+)
G250496 NA non-coding downstream 2905 35387404 ~ 35387667 (+)
G250497 NA non-coding downstream 3242 35387741 ~ 35457768 (+)
G250555 NA non-coding downstream 98445 35482944 ~ 35483191 (+)
ptprub ptpru non-coding downstream 100648 35258095 ~ 35611096 (+)
G249323 NA other upstream 963508 34419890 ~ 34420612 (+)
G249245 NA other upstream 1081213 34302572 ~ 34302907 (+)
G248795 NA other upstream 1371063 34006158 ~ 34013057 (+)
G251773 NA other downstream 1127075 36511574 ~ 36579307 (+)
G251845 zdhhc18 other downstream 1239111 36623610 ~ 36627542 (+)
G253299 NA other downstream 2342449 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 2707823 38092322 ~ 38092734 (+)
G254204 NA other downstream 3056667 38441166 ~ 38441734 (+)

Expression


Co-expression Network