Gene
RNA
| Item | Value |
|---|---|
| gene id | G250770 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 35385205 ~ 35385471 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU285978 | True | 267 | lncRNA | 0.36 | 1 | 35385205 | 35385471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-34d22.1 | LOC106584244 | coding | downstream | 182262 | 35175483 ~ 35202943 (-) |
| taf12 | taf12 | coding | downstream | 209941 | 35169845 ~ 35175264 (-) |
| LOC118944512 | NA | coding | downstream | 294812 | 35089126 ~ 35090393 (-) |
| cited4b | LOC106584212 | coding | downstream | 332924 | 35049466 ~ 35052281 (-) |
| vegf | vegf | coding | downstream | 553977 | 34814879 ~ 34831228 (-) |
| LOC110519653 | LOC106584320 | coding | upstream | 717372 | 36102843 ~ 36109194 (-) |
| stmn1b | LOC106584327 | coding | upstream | 726716 | 36112187 ~ 36117544 (-) |
| LOC110519907 | oprd1 | coding | upstream | 1050910 | 36436381 ~ 36437754 (-) |
| LOC110504056 | NA | coding | upstream | 1101404 | 36486875 ~ 36505339 (-) |
| tent5ba | fam46b | coding | upstream | 1158699 | 36544170 ~ 36568553 (-) |
| G250767 | NA | non-coding | downstream | 2434 | 35382498 ~ 35382771 (-) |
| G250766 | NA | non-coding | downstream | 2794 | 35382185 ~ 35382411 (-) |
| G250752 | NA | non-coding | downstream | 20304 | 35357516 ~ 35364901 (-) |
| G250711 | NA | non-coding | downstream | 83744 | 35301217 ~ 35301461 (-) |
| G250707 | NA | non-coding | downstream | 87692 | 35297224 ~ 35297513 (-) |
| G250771 | NA | non-coding | upstream | 182 | 35385653 ~ 35386633 (-) |
| G250833 | ptpru | non-coding | upstream | 95546 | 35481017 ~ 35481293 (-) |
| G250855 | NA | non-coding | upstream | 128476 | 35513947 ~ 35514151 (-) |
| G250868 | NA | non-coding | upstream | 145629 | 35531100 ~ 35531422 (-) |
| G250879 | NA | non-coding | upstream | 160915 | 35546386 ~ 35546619 (-) |
| G249990 | NA | other | downstream | 488909 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 495251 | 34889506 ~ 34889954 (-) |
| G249485 | LOC106584080 | other | downstream | 1025754 | 34357275 ~ 34359451 (-) |
| G248239 | LOC106605043 | other | downstream | 1965498 | 33419429 ~ 33419707 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 3804003 | 31562384 ~ 31631107 (-) |
| G251462 | LOC106584332 | other | upstream | 754641 | 36140112 ~ 36144572 (-) |
| G251681 | NA | other | upstream | 972012 | 36357325 ~ 36357971 (-) |
| gpatch3 | gpatch3 | other | upstream | 1346374 | 36731832 ~ 36754332 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 4013790 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 4259100 | 39644571 ~ 39645743 (-) |
