Gene
RNA
| Item | Value |
|---|---|
| gene id | G250879 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 35546386 ~ 35546619 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU286088 | True | 234 | lncRNA | 0.52 | 1 | 35546386 | 35546619 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-34d22.1 | LOC106584244 | coding | downstream | 343443 | 35175483 ~ 35202943 (-) |
| taf12 | taf12 | coding | downstream | 371122 | 35169845 ~ 35175264 (-) |
| LOC118944512 | NA | coding | downstream | 455993 | 35089126 ~ 35090393 (-) |
| cited4b | LOC106584212 | coding | downstream | 494105 | 35049466 ~ 35052281 (-) |
| vegf | vegf | coding | downstream | 715158 | 34814879 ~ 34831228 (-) |
| LOC110519653 | LOC106584320 | coding | upstream | 556224 | 36102843 ~ 36109194 (-) |
| stmn1b | LOC106584327 | coding | upstream | 565568 | 36112187 ~ 36117544 (-) |
| LOC110519907 | oprd1 | coding | upstream | 889762 | 36436381 ~ 36437754 (-) |
| LOC110504056 | NA | coding | upstream | 940256 | 36486875 ~ 36505339 (-) |
| tent5ba | fam46b | coding | upstream | 997551 | 36544170 ~ 36568553 (-) |
| G250868 | NA | non-coding | downstream | 14964 | 35531100 ~ 35531422 (-) |
| G250855 | NA | non-coding | downstream | 32235 | 35513947 ~ 35514151 (-) |
| G250833 | ptpru | non-coding | downstream | 65093 | 35481017 ~ 35481293 (-) |
| G250771 | NA | non-coding | downstream | 159753 | 35385653 ~ 35386633 (-) |
| G250770 | NA | non-coding | downstream | 160915 | 35385205 ~ 35385471 (-) |
| G250884 | NA | non-coding | upstream | 6798 | 35553417 ~ 35553715 (-) |
| G250892 | NA | non-coding | upstream | 16861 | 35563480 ~ 35563842 (-) |
| G250894 | NA | non-coding | upstream | 19286 | 35565905 ~ 35566168 (-) |
| G250896 | NA | non-coding | upstream | 23130 | 35569749 ~ 35569966 (-) |
| G250902 | NA | non-coding | upstream | 33995 | 35580614 ~ 35580856 (-) |
| G249990 | NA | other | downstream | 650090 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 656432 | 34889506 ~ 34889954 (-) |
| G249485 | LOC106584080 | other | downstream | 1186935 | 34357275 ~ 34359451 (-) |
| G248239 | LOC106605043 | other | downstream | 2126679 | 33419429 ~ 33419707 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 3965184 | 31562384 ~ 31631107 (-) |
| G251462 | LOC106584332 | other | upstream | 593493 | 36140112 ~ 36144572 (-) |
| G251681 | NA | other | upstream | 810864 | 36357325 ~ 36357971 (-) |
| gpatch3 | gpatch3 | other | upstream | 1185226 | 36731832 ~ 36754332 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 3852642 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 4097952 | 39644571 ~ 39645743 (-) |
